Difference between revisions of "Part:BBa K4347001:Design"

 
Line 6: Line 6:
  
  
===Design Notes===
+
===Design - Conserved Motif Analysis===
TBA
+
  
 +
MEME analysis - do later (can be same for all 6 primers)
  
  
===Source===
+
===Design - F3 Design===
  
Conserved 16s rRNA regions on ___ water pathogens.
+
Primer design software used to make F3 - do later
 +
 
 +
 
 +
===Considerations===
 +
 
 +
Different lengths for MEME analysis results of conserved motifs (can be same for all 6 primers) - do later
 +
 
 +
<!-- ===Source=== -->
  
 
===References===
 
===References===

Revision as of 02:39, 8 July 2022


Forward Outer primer (F3)


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


Design - Conserved Motif Analysis

MEME analysis - do later (can be same for all 6 primers)


Design - F3 Design

Primer design software used to make F3 - do later


Considerations

Different lengths for MEME analysis results of conserved motifs (can be same for all 6 primers) - do later


References