Difference between revisions of "Part:BBa K4035011"
 
(One intermediate revision by the same user not shown)
Line 3: Line 3:
 
<partinfo>BBa_K4035011 short</partinfo>
 
<partinfo>BBa_K4035011 short</partinfo>
  
−
This part is made of the Gal1 promoter (BBa_J63006), the A-agglutinin-binding subunit Aga2 (BBa_K416000) linked to the dimer protein CUP1-(AP)7-CUP1 (BBa_K4035004) and the V5 tag (BBa_T2020).
 
  
−
===Usage and Biology===
+
This part is the expression system of the CUP1 dimer ([https://parts.igem.org/Part:BBa_K4035004 BBa_K4035004]). It has been made by inserting the sequence into the pCTcon2-V5 plasmid (1) and is composed of the Gal1 promoter ([https://parts.igem.org/Part:BBa_J63006 BBa_J63006]), the A-agglutinin-binding subunit Aga2 ([https://parts.igem.org/Part:BBa_K416000 BBa_K416000]) linked to the dimer protein CUP1-(AP)7-CUP1 ([https://parts.igem.org/Part:BBa_K4035004 BBa_K4035004]) and the V5 tag ([https://parts.igem.org/Part:BBa_T2020 BBa_T2020]).
  
−
Copper metallotionein CUP1 (BBa_M45090) is a protein responsible for copper binding protein in the yeast Saccharomyces cerevisiae. In order to increase the copper retrieval efficiency, two copies of CUP1 were linked together and expressed at the outter surface of S. cerevisiae. Aga2 attaches to the yeast cell wall through disulfide bonds to Aga1p. The fusion of the dimer and Aga2 then leads to the presence of the CUP1 dimer on the outter membrane of the cell. This fusion protein also contained a V5 tag in order to check its expression by Western Blot and Immunostaining. The expression was under the control of the Gal1 promoter, so that the protein was expressed only in the presence of galactose.
 
  
−
===Characterization===
 
  
−
===Sequence and Features===
+
==Usage and Biology==
 +
 
 +
Copper metallothionein CUP1 ([https://parts.igem.org/Part:BBa_M45090 BBa_M45090]) is a protein responsible for copper binding protein in the yeast Saccharomyces cerevisiae. In order to increase the copper retrieval efficiency, two copies of CUP1 were linked together ([https://parts.igem.org/Part:BBa_K4035004 BBa_K4035004]) and expressed on the external surface of S. cerevisiae by fusion with the A-agglutinin-binding subunit Aga2 ([https://parts.igem.org/Part:BBa_K416000 BBa_K416000]). Aga2 attaches to the yeast cell wall through disulfide bonds to Aga1p. The fusion of the dimer and Aga2 then leads to the presence of the CUP1 dimer on the outer membrane of the cell. The goal behind it was to improve the endogenous bio-accumulation property of wild type yeast by allowing it to bind more copper ions on its external surface.
 +
 
 +
This fusion protein also contains a V5 tag ([https://parts.igem.org/Part:BBa_T2020 BBa_T2020]) in order to check its expression by Western Blot and Immunocytochemistry. The expression is under the control of the Gal1 promoter ([https://parts.igem.org/Part:BBa_J63006 BBa_J63006]), so that the protein is expressed only in the presence of galactose.
 +
 
 +
 
 +
 
 +
==Sequence and Features==
 
<partinfo>BBa_K4035011 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K4035011 SequenceAndFeatures</partinfo>
  
 +
 +
 +
 +
==Characterization==
 +
 +
The characterization of this part can be found on the [https://parts.igem.org/Part:BBa_K4035004 Part:BBa K4035004] page describing the dimer sequence.
  
 
<!-- Uncomment this to enable Functional Parameter display  
 
<!-- Uncomment this to enable Functional Parameter display  

Latest revision as of 20:54, 21 October 2021


Expression of the CUP1-(AP)7-CUP1 dimer on the extracellular membrane of S. cerevisiae


This part is the expression system of the CUP1 dimer (BBa_K4035004). It has been made by inserting the sequence into the pCTcon2-V5 plasmid (1) and is composed of the Gal1 promoter (BBa_J63006), the A-agglutinin-binding subunit Aga2 (BBa_K416000) linked to the dimer protein CUP1-(AP)7-CUP1 (BBa_K4035004) and the V5 tag (BBa_T2020).


Usage and Biology

Copper metallothionein CUP1 (BBa_M45090) is a protein responsible for copper binding protein in the yeast Saccharomyces cerevisiae. In order to increase the copper retrieval efficiency, two copies of CUP1 were linked together (BBa_K4035004) and expressed on the external surface of S. cerevisiae by fusion with the A-agglutinin-binding subunit Aga2 (BBa_K416000). Aga2 attaches to the yeast cell wall through disulfide bonds to Aga1p. The fusion of the dimer and Aga2 then leads to the presence of the CUP1 dimer on the outer membrane of the cell. The goal behind it was to improve the endogenous bio-accumulation property of wild type yeast by allowing it to bind more copper ions on its external surface.

This fusion protein also contains a V5 tag (BBa_T2020) in order to check its expression by Western Blot and Immunocytochemistry. The expression is under the control of the Gal1 promoter (BBa_J63006), so that the protein is expressed only in the presence of galactose.


Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal PstI site found at 900
    Illegal PstI site found at 1122
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal PstI site found at 900
    Illegal PstI site found at 1122
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal PstI site found at 900
    Illegal PstI site found at 1122
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal PstI site found at 900
    Illegal PstI site found at 1122
    Illegal AgeI site found at 150
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal SapI.rc site found at 1116



Characterization

The characterization of this part can be found on the Part:BBa K4035004 page describing the dimer sequence.