Difference between revisions of "Part:BBa K3924019"

 
 
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<span class='h3bb'>Sequence and Features</span>
 
<span class='h3bb'>Sequence and Features</span>
 
<partinfo>BBa_K3924019 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K3924019 SequenceAndFeatures</partinfo>
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==Profile==
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Name: mchX<br/>
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Base Pairs: 120bp<br/>
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Origin: Escherichia coli, synthesis<br/>
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Properties: Microcin H47(MccH47) expression regulatory protein<br/>
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==Usage and Biology==
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mchX was obtained from E. coli strain CA46. It encodes MchX whose function was unsure. MchX might play a role in the regulation of mchB and mchI's expression<sup>[1]</sup> <br/>
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==Design and Construction==
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We introduce mchX gene from E.coli CA46 into E.coli Nissle 1917. The sequence was obtained from E. coli CA46 microcin operon(GenBank: AJ515251.1). The mchX gene is added into lac operator(on RGP plasmid) so that the mchX can only be expressed induced by IPTG.Due to the time cost of obtaining the sequence, the sequence was submitted to the company for synthesis and we sequenced it to verify the correctness of the synthetic sequence. The sequence was added to RGP plasmid by Hifi DNA assembly replacing the TMAR sequence for further use.<br/>
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[[Image: T--Tsinghua--part_mchX_construct.png|center|600px|thumb|'''Figure 1: The design of mchX''']]
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==Reference==
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[1] Vassiliadis G, Destoumieux-Garzón D, Lombard C, Rebuffat S, Peduzzi J. Isolation and characterization of two members of the siderophore-microcin family, microcins M and H47. Antimicrobial Agents and Chemotherapy. 2010 Jan;54(1):288-297. DOI: 10.1128/aac.00744-09. PMID: 19884380; PMCID: PMC2798501. <br/>
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Latest revision as of 09:31, 21 October 2021


mchX.MchX might play a role in the regulation of mchB and mchI's expression


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]

Profile

Name: mchX
Base Pairs: 120bp
Origin: Escherichia coli, synthesis
Properties: Microcin H47(MccH47) expression regulatory protein

Usage and Biology

mchX was obtained from E. coli strain CA46. It encodes MchX whose function was unsure. MchX might play a role in the regulation of mchB and mchI's expression[1]

Design and Construction

We introduce mchX gene from E.coli CA46 into E.coli Nissle 1917. The sequence was obtained from E. coli CA46 microcin operon(GenBank: AJ515251.1). The mchX gene is added into lac operator(on RGP plasmid) so that the mchX can only be expressed induced by IPTG.Due to the time cost of obtaining the sequence, the sequence was submitted to the company for synthesis and we sequenced it to verify the correctness of the synthetic sequence. The sequence was added to RGP plasmid by Hifi DNA assembly replacing the TMAR sequence for further use.

Figure 1: The design of mchX


Reference

[1] Vassiliadis G, Destoumieux-Garzón D, Lombard C, Rebuffat S, Peduzzi J. Isolation and characterization of two members of the siderophore-microcin family, microcins M and H47. Antimicrobial Agents and Chemotherapy. 2010 Jan;54(1):288-297. DOI: 10.1128/aac.00744-09. PMID: 19884380; PMCID: PMC2798501.