Difference between revisions of "Part:BBa K4032102"

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<partinfo>BBa_K4032102 short</partinfo>
 
<partinfo>BBa_K4032102 short</partinfo>
  
・E.coli alpha-galactosidase gene melA  (see info NCBI : NC_000913.3) under control of the lac promoter (Part:BBa R0010 - parts.igem.org).
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Contents:
・RBS (Part:BBa R0010 - parts.igem.org) and double terminator ( Part:BBa B0015 - parts.igem.org) are included.
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designs
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・The lac promoter https://parts.igem.org/Part:BBa_R0010
This part was created by In-Fusion method using BBa_J04450 as inverse and melA from E.coli K-12 as insert.
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・The  RBS  https://parts.igem.org/Part:BBa_B0034
  
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・The E.coli alpha-galactosidase gene melA ()
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・The double terminator https://parts.igem.org/Part:BBa_B0015
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===Usage and Biology===
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This enzyme catalyzes the hydrolysis of terminal, non-reducing alpha-D-galactose residues in alpha-D-galactosides, including galactose oligosaccharides, galactomannans and galactolipids. https://www.uniprot.org/uniprot/P06720
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===Design===
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The lac promoter and the double terminator are added to BBa_K40320xx, forming this part.
 +
 +
The lac promoter and the double terminator are used from BBa_J04450 (https://parts.igem.org/Part:BBa_J04450) .
 +
 +
 +
This part was created by In-Fusion method using BBa_J04450 (https://parts.igem.org/Part:BBa_J04450) and melA from E.coli K-12 as an insert.
 +
 +
 +
 +
https://2021.igem.org/wiki/images/thumb/e/e6/T--Gunma--%CE%B1-galactosidase-stop-design.png/800px-T--Gunma--%CE%B1-galactosidase-stop-design.png
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Fig.1 The plasmid design of K40320xx
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==Experiments==
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Time course
 
BL21(DE3)
 
BL21(DE3)
  
Fig1 The growth of E.coli (BL21(DE3)) expressing of alpha-galactosidase  
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https://2021.igem.org/wiki/images/c/c1/T--Gunma--%CE%B1-galactosidase-timecourse-BL21.png
Pre-culture was performed at 37°C for 16 hours. Incubation was carried out at 37°C, 130 rpm.
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We measured OD600 every 4 hours.
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Fig. 2 The growth of E.coli (BL21(DE3)) expressing of alpha-galactosidase  
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Pre-culture : 37 ℃, 16 h (130 rpm)
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Culture : 37 ℃ (130rpm)
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・Measuring OD600 every 4 hours
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DH5α
 
DH5α
  
Fig2 The growth of E.coli (DH5α)) expressing of alpha-galactosidase  
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https://2021.igem.org/wiki/images/5/5a/T--Gunma--%CE%B1-galactosidase-timecourse-dh5%CE%B1.png
Pre-culture was performed at 34°C for 16 hours. Incubation was carried out at 37°C, 130 rpm.
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We measured OD600 every 4 hours.
+
 
 +
Fig. 3 The growth of E.coli (DH5α)) expressing of alpha-galactosidase  
 +
 
 +
Pre-culture : 34 ℃, 16 h (130 rpm)
 +
 
 +
Culture : 37 ℃ (130rpm)
 +
 
 +
・Measuring OD600 every 4 hours
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Revision as of 08:46, 20 October 2021


lacI+RBS+α-gal+double terminator

Contents:

・The lac promoter https://parts.igem.org/Part:BBa_R0010

・The RBS https://parts.igem.org/Part:BBa_B0034

・The E.coli alpha-galactosidase gene melA ()

・The double terminator https://parts.igem.org/Part:BBa_B0015


Usage and Biology

This enzyme catalyzes the hydrolysis of terminal, non-reducing alpha-D-galactose residues in alpha-D-galactosides, including galactose oligosaccharides, galactomannans and galactolipids. https://www.uniprot.org/uniprot/P06720


Design

The lac promoter and the double terminator are added to BBa_K40320xx, forming this part.

The lac promoter and the double terminator are used from BBa_J04450 (https://parts.igem.org/Part:BBa_J04450) .


This part was created by In-Fusion method using BBa_J04450 (https://parts.igem.org/Part:BBa_J04450) and melA from E.coli K-12 as an insert.


800px-T--Gunma--%CE%B1-galactosidase-stop-design.png


Fig.1 The plasmid design of K40320xx


Experiments

Time course BL21(DE3)

T--Gunma--%CE%B1-galactosidase-timecourse-BL21.png


Fig. 2 The growth of E.coli (BL21(DE3)) expressing of alpha-galactosidase

Pre-culture : 37 ℃, 16 h (130 rpm)

Culture : 37 ℃ (130rpm)

・Measuring OD600 every 4 hours


DH5α

T--Gunma--%CE%B1-galactosidase-timecourse-dh5%CE%B1.png


Fig. 3 The growth of E.coli (DH5α)) expressing of alpha-galactosidase

Pre-culture : 34 ℃, 16 h (130 rpm)

Culture : 37 ℃ (130rpm)

・Measuring OD600 every 4 hours


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 2137
    Illegal AgeI site found at 2249
  • 1000
    COMPATIBLE WITH RFC[1000]