Difference between revisions of "Part:BBa K3888003:Design"
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__NOTOC__
 
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<partinfo>BBa_K3888003 short</partinfo>
 
<partinfo>BBa_K3888003 short</partinfo>
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[[File:T--SJTang--BBa_K3888011-1.png]]<partinfo>BBa_K3888003 SequenceAndFeatures</partinfo>
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[[File:T--SJTang--BBa_K3888011-1.png]]
 
==Figure 1: The Oxygen-tolerant Hydrogenase introduction plasmid constructed, which has a length of 8261bp.==
 
==Figure 1: The Oxygen-tolerant Hydrogenase introduction plasmid constructed, which has a length of 8261bp.==
 +
 
HoxG1 encodes the large subunit of oxygen-tolerant hydrogenase, and it's controlled by a Lac operator. Overall, it's clear to see that this gene is located between 5094bp and 6926bp.
 
HoxG1 encodes the large subunit of oxygen-tolerant hydrogenase, and it's controlled by a Lac operator. Overall, it's clear to see that this gene is located between 5094bp and 6926bp.
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<partinfo>BBa_K3888003 SequenceAndFeatures</partinfo>
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===Design Notes===
 
===Design Notes===
 
Codon optimization for E. coli
 
Codon optimization for E. coli

Revision as of 03:04, 18 October 2021


HoxG1 T--SJTang--BBa K3888011-1.png

Figure 1: The Oxygen-tolerant Hydrogenase introduction plasmid constructed, which has a length of 8261bp.

HoxG1 encodes the large subunit of oxygen-tolerant hydrogenase, and it's controlled by a Lac operator. Overall, it's clear to see that this gene is located between 5094bp and 6926bp.


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal XbaI site found at 282
    Illegal XbaI site found at 384
    Illegal SpeI site found at 450
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal SpeI site found at 450
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 597
    Illegal BamHI site found at 1512
    Illegal XhoI site found at 1834
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal XbaI site found at 282
    Illegal XbaI site found at 384
    Illegal SpeI site found at 450
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal XbaI site found at 282
    Illegal XbaI site found at 384
    Illegal SpeI site found at 450
    Illegal AgeI site found at 1728
  • 1000
    COMPATIBLE WITH RFC[1000]

Design Notes

Codon optimization for E. coli


Source

Hydrogenovibrio marinus MH-110 Genome

References