Difference between revisions of "Plasmid backbones/Other standards"
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==Lim assembly standard plasmid backbones== | ==Lim assembly standard plasmid backbones== | ||
− | Students in Wendell Lim's lab have developed a new assembly standard. See [http://2008.igem.org/Everything_you_ever_wanted_to_know_about_AarI the 2008 UCSF iGEM team wiki] for more details. | + | Students in Wendell Lim's lab have developed a new assembly standard. See [http://2008.igem.org/Everything_you_ever_wanted_to_know_about_AarI the 2008 UCSF iGEM team wiki] for more details. Note these plasmid backbones are primarily intended for use when working with [[Yeast|yeast]]. |
<parttable>lim_plasmid</parttable> | <parttable>lim_plasmid</parttable> |
Revision as of 23:44, 12 December 2008
Part assembly | System operation | Protein expression | Assembly of protein fusions | Part measurement | Screening of part libraries | Building BioBrick vectors | DNA synthesis | Other standards | Archive |
Or get some help on plasmid backbones. |
For plasmid backbones that adhere to the Silver or Freiburg standards, please see plasmid backbones for protein fusions.
Berkeley assembly standard plasmid backbones
Researchers at UC Berkeley have developed a new assembly standard. See [http://openwetware.org/wiki/The_BioBricks_Foundation:Standards/Technical/Formats#The_Berkeley_.28BBb.29_Format the BioBricks Foundation wiki] for more details.
There are no parts for this table
Lim assembly standard plasmid backbones
Students in Wendell Lim's lab have developed a new assembly standard. See [http://2008.igem.org/Everything_you_ever_wanted_to_know_about_AarI the 2008 UCSF iGEM team wiki] for more details. Note these plasmid backbones are primarily intended for use when working with yeast.
There are no parts for this table
Sergio Peisajovich and Andrew Horowitz, from Wendell Lim's lab, developed several of the yeast plasmid backbones as an instructor of the 2008 UCSF iGEM team. |
Plasmids used in DNA synthesis of BioBrick® parts
Most DNA synthesis companies do not currently use BioBrick® plasmid backbones to clone synthesized BioBrick® parts. Therefore, some parts in the Registry are available in non-standard plasmid backbones because they were constructed via direct DNA synthesis. Here is a list of plasmid backbones used by assorted DNA synthesis companies.
Name | Description | Resistance | Replicon | Copy number | Chassis | Length |
---|---|---|---|---|---|---|
BBa_J70003 | Geneart Cloning Plasmid pGA4 | A | 2961 | |||
BBa_J70004 | BioBasic Cloning Plasmid pUC57 | A | 2710 | |||
BBa_J70022 | GENEART pGA4 plasmid | 2978 | ||||
BBa_K2812001 | Coding sequence for trunctated Lysostaphin | 738 | ||||
BBa_K2812003 | Coding sequence for trunctated Lysostaphin regulated by T7-promoter | 776 | ||||
BBa_K2812004 | Coding sequence for trunctated Lysostaphin fused to His-tagged HlyA | 1458 | ||||
BBa_K2812005 | Coding sequence for trunctated Lysostaphin with HlyA and His6-tag regulated by T7-promoter | 1496 | ||||
BBa_K2812006 | Coding sequence for Pyocin S5 with HlyA and His6-tag | 2217 | ||||
BBa_K2812007 | Coding sequence for Pyocin S5 with HlyA and His6-tag regulated by pBAD-ara promoter | 2288 | ||||
BBa_K5293014 | pHREAC_eGFP_ER | 10477 | ||||
pSB1A1 | pUC19 with a BioBrick cloning site (Replaced by pSB1A3) | A | pMB1 | 500-700 | 2708 |
Other miscellaneous vectors
The Registry also have miscellaneous other plasmid backbones. These plasmid backbones have not undergone Registry curation, but we include them here for completeness.