Difference between revisions of "Plasmid backbones/Other standards"

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==Lim assembly standard plasmid backbones==
 
==Lim assembly standard plasmid backbones==
Students in Wendell Lim's lab have developed a new assembly standard.  See [http://2008.igem.org/Everything_you_ever_wanted_to_know_about_AarI the 2008 UCSF iGEM team wiki] for more details.
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Students in Wendell Lim's lab have developed a new assembly standard.  See [http://2008.igem.org/Everything_you_ever_wanted_to_know_about_AarI the 2008 UCSF iGEM team wiki] for more details.  Note these plasmid backbones are primarily intended for use when working with [[Yeast|yeast]].
  
 
<parttable>lim_plasmid</parttable>  
 
<parttable>lim_plasmid</parttable>  

Revision as of 23:44, 12 December 2008

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Plasmid backbones/Other standards
Part assembly System operation Protein expression Assembly of protein fusions Part measurement Screening of part libraries Building BioBrick vectors DNA synthesis Other standards Archive
Or get some help on plasmid backbones.

For plasmid backbones that adhere to the Silver or Freiburg standards, please see plasmid backbones for protein fusions.

Berkeley assembly standard plasmid backbones

Researchers at UC Berkeley have developed a new assembly standard. See [http://openwetware.org/wiki/The_BioBricks_Foundation:Standards/Technical/Formats#The_Berkeley_.28BBb.29_Format the BioBricks Foundation wiki] for more details.


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Lim assembly standard plasmid backbones

Students in Wendell Lim's lab have developed a new assembly standard. See [http://2008.igem.org/Everything_you_ever_wanted_to_know_about_AarI the 2008 UCSF iGEM team wiki] for more details. Note these plasmid backbones are primarily intended for use when working with yeast.


There are no parts for this table


SergioPeisajovichPhoto.jpg AndrewHorowitzPhoto.jpg Sergio Peisajovich and Andrew Horowitz, from Wendell Lim's lab, developed several of the yeast plasmid backbones as an instructor of the 2008 UCSF iGEM team.

Plasmids used in DNA synthesis of BioBrick® parts

Most DNA synthesis companies do not currently use BioBrick® plasmid backbones to clone synthesized BioBrick® parts. Therefore, some parts in the Registry are available in non-standard plasmid backbones because they were constructed via direct DNA synthesis. Here is a list of plasmid backbones used by assorted DNA synthesis companies.


More...
NameDescriptionResistanceRepliconCopy
number
ChassisLength
BBa_J70003Geneart Cloning Plasmid pGA4A   2961
BBa_J70004BioBasic Cloning Plasmid pUC57A   2710
BBa_J70022GENEART pGA4 plasmid    2978
BBa_K2812001Coding sequence for trunctated Lysostaphin     738
BBa_K2812003Coding sequence for trunctated Lysostaphin regulated by T7-promoter    776
BBa_K2812004Coding sequence for trunctated Lysostaphin fused to His-tagged HlyA    1458
BBa_K2812005Coding sequence for trunctated Lysostaphin with HlyA and His6-tag regulated by T7-promoter    1496
BBa_K2812006Coding sequence for Pyocin S5 with HlyA and His6-tag    2217
BBa_K2812007Coding sequence for Pyocin S5 with HlyA and His6-tag regulated by pBAD-ara promoter    2288
BBa_K5293014pHREAC_eGFP_ER    10477
pSB1A1pUC19 with a BioBrick cloning site (Replaced by pSB1A3)ApMB1500-700 2708


Other miscellaneous vectors

The Registry also have miscellaneous other plasmid backbones. These plasmid backbones have not undergone Registry curation, but we include them here for completeness.