Difference between revisions of "Part:BBa K165095"
Line 8: | Line 8: | ||
To build a (heretofore untested) limiter, this part should be in a yeast strain with the following constructs: | To build a (heretofore untested) limiter, this part should be in a yeast strain with the following constructs: | ||
− | A) [[Part:BBa_K165080]] pGAL1 + Untagged LexA activator on pRS305 | + | A) [[Part:BBa_K165080]] pGAL1 + Untagged LexA activator on pRS305<br> |
− | G) [[Part:BBa_K165078]] LexA activable reporter on pRS306 | + | G) [[Part:BBa_K165078]] LexA activable reporter on pRS306<br> |
− | Into mating type a. Knock out the Gal2 gene for a tunable level of induction. | + | Into mating type a. Knock out the Gal2 gene for a tunable level of induction.<br> |
− | R) [[Part:BBa_K165090]] Gli1 bs + LexA bs + mCYC + LexA repressor (mCherryx2 tagged) on pRS306 | + | R) [[Part:BBa_K165090]] Gli1 bs + LexA bs + mCYC + LexA repressor (mCherryx2 tagged) on pRS306<br> |
− | Alpha) [[Part:BBa K165095]] Gli1 bs + LexA bs + mCYC + Zif268-HIV repressor (mCherryx2 tagged) on pRS303 | + | Alpha) [[Part:BBa K165095]] Gli1 bs + LexA bs + mCYC + Zif268-HIV repressor (mCherryx2 tagged) on pRS303 <br> |
− | Tau) [[Part:BBa_K165096]] Zif268-HIV bs + MET25+ Gli1 repressor (CFPx2 tagged) on pRS304* | + | Tau) [[Part:BBa_K165096]] Zif268-HIV bs + MET25+ Gli1 repressor (CFPx2 tagged) on pRS304* <br> |
− | Into mating type alpha. Knock out the Gal2 gene for a tunable level of induction. | + | Into mating type alpha. Knock out the Gal2 gene for a tunable level of induction.<br> |
Mate the two types, select on SD-His-Trp-Leu-Ura | Mate the two types, select on SD-His-Trp-Leu-Ura |
Revision as of 05:31, 30 October 2008
Gli1 bs + LexA bs + mCYC + Zif268-HIV repressor (mCherryx2 tagged) on pRS303
This devise constitutes the alpha element in one instance of our limiter construct. It is placed in a mutually inhibitory relationship with the tau element. Under the control of the same promoter as the gene of interest, alpha serves as a readout of its level of induction. In a superthreshold state, it represses tau, allowing R to be expressed and repress G back the threshold level.
To build a (heretofore untested) limiter, this part should be in a yeast strain with the following constructs:
A) Part:BBa_K165080 pGAL1 + Untagged LexA activator on pRS305
G) Part:BBa_K165078 LexA activable reporter on pRS306
Into mating type a. Knock out the Gal2 gene for a tunable level of induction.
R) Part:BBa_K165090 Gli1 bs + LexA bs + mCYC + LexA repressor (mCherryx2 tagged) on pRS306
Alpha) Part:BBa K165095 Gli1 bs + LexA bs + mCYC + Zif268-HIV repressor (mCherryx2 tagged) on pRS303
Tau) Part:BBa_K165096 Zif268-HIV bs + MET25+ Gli1 repressor (CFPx2 tagged) on pRS304*
Into mating type alpha. Knock out the Gal2 gene for a tunable level of induction.
Mate the two types, select on SD-His-Trp-Leu-Ura
Inputs: Set the threshold by tuning [Met] between 0 and 500 uM Set the level of induction (A) with Galactose between 0-3%
Outputs expected: Subthreshold: CFP in the nucleus from Tau, YFP in the cytosol proportionate to subthreshold induction from G being activated by A and not repressed by R.
Superthreshold: mCherry in the nucleus from Alpha and R induction. YFP in cytosol levels out at threshold limit despite rising induction.
Sequence and Features
- 10INCOMPATIBLE WITH RFC[10]Illegal SpeI site found at 534
- 12INCOMPATIBLE WITH RFC[12]Illegal SpeI site found at 534
- 21INCOMPATIBLE WITH RFC[21]Illegal BglII site found at 2321
Illegal XhoI site found at 1
Illegal XhoI site found at 122
Illegal XhoI site found at 284 - 23INCOMPATIBLE WITH RFC[23]Illegal SpeI site found at 534
- 25INCOMPATIBLE WITH RFC[25]Illegal SpeI site found at 534
Illegal AgeI site found at 3464 - 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI site found at 119
Illegal SapI.rc site found at 1492
Illegal SapI.rc site found at 2085