Difference between revisions of "Part:BBa K3507004"

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<span class='h3bb'>Sequence and Features</span>
 
<span class='h3bb'>Sequence and Features</span>
 
<partinfo>BBa_k3507004 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_k3507004 SequenceAndFeatures</partinfo>
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===Functional Parameters===
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<partinfo>BBa_k3507004 parameters</partinfo>
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Revision as of 19:29, 26 October 2020

Constitutive promoter of B. subtilis

The pta promoter of Bacillus subtilis is the region that initiates the transcription of the phosphotransacetylase coding gene. A study by Presecan-Siedel and colleagues from 1999 characterised in detail the pta gene and its promoter from the wild type strain of B. subtilis 168. Fig. 1 taken from this study, illustrates the topology of this promoter as well as the beginning region of the pta gene. Here, they highlighted the putative -10 and -35 regions important for RNA-polymerase binding. For testing the effect of these regions, the up mentioned group deleted the -10 region of the promoter and fused the remaining part to a reporter gene (lacZ). Afterwards, they integrated this fusion at the amyE gene locus of B. subtilis and observed a lower expression level of this genes compared to the expression level when both regions are present. Thus, the promoter is described as a σA –dependent promoter promoter. Another important characteristic for this promoter is the presence of a CRE sequence located between positions -62 and -49 that is responsible for catabolite-activation of this gene.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]