Difference between revisions of "Part:BBa K3380151"
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DIR2s-Apt is a fluorescent RNA aptamer comprising a short ribonucleotide sequence that exhibits fluorescence upon binding to a specific fluorophore. | DIR2s-Apt is a fluorescent RNA aptamer comprising a short ribonucleotide sequence that exhibits fluorescence upon binding to a specific fluorophore. | ||
| + | ===Characterization=== | ||
| + | The DIR2s-Apt fluorescent RNA aptamer was described by [https://pubs.acs.org/doi/full/10.1021/jacs.7b04211 Tan ''et al.'' (2017)]. | ||
| + | |||
| + | The iSpinach folding prediction as simulated by [http://www.nupack.org// NUPACK] is shown below. | ||
| + | |||
| + | [[File:Part_BBa_K3380150.png|400px|iSpinach folding]] | ||
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Revision as of 13:30, 8 October 2020
DIR2s-Apt fluorescent RNA aptamer
DIR2s-Apt is a fluorescent RNA aptamer comprising a short ribonucleotide sequence that exhibits fluorescence upon binding to a specific fluorophore.
Characterization
The DIR2s-Apt fluorescent RNA aptamer was described by Tan et al. (2017).
The iSpinach folding prediction as simulated by [http://www.nupack.org// NUPACK] is shown below.
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]