Difference between revisions of "Part:BBa K3285700"

 
 
(14 intermediate revisions by the same user not shown)
Line 5: Line 5:
 
pbrD is a protein that sequesters lead. It is present downstream of a strong RBS (BBa_B0034) and binds to lead ions in the cytoplasm and decrease its concentration.
 
pbrD is a protein that sequesters lead. It is present downstream of a strong RBS (BBa_B0034) and binds to lead ions in the cytoplasm and decrease its concentration.
  
<!-- Add more about the biology of this part here
 
 
===Usage and Biology===
 
===Usage and Biology===
  
 +
This is an intermediate part which can be incorporated under a promoter. The pbrD protein is known to sequester lead ions in the cytoplasm of the bacterial cell.
 +
 +
When put under a lead responsive promoter, the part is expected to show dosage dependent sequestration properties.
 +
 +
===Construction===
 +
 +
"https://2019.igem.org/wiki/images/d/d2/T--IISER-Pune-India--pbrD_Gel.jpeg"
 +
<p>
 +
The part was artificially synthesised with corresponding primers that have overlap with GFP sequence. This allows it to be put downstream of the lead dependent biosensor [https://parts.igem.org/Part:BBa_K1758333 BBa_K1758333]. This part has been synthesised with a strong Ribosome Binding Site [https://parts.igem.org/Part:BBa_B0034 BBa_B0034] upstream of the coding sequence.
 +
</p>
 
<!-- -->
 
<!-- -->
 
<span class='h3bb'>Sequence and Features</span>
 
<span class='h3bb'>Sequence and Features</span>

Latest revision as of 17:49, 21 October 2019


Lead Sequestration Protein with RBS

pbrD is a protein that sequesters lead. It is present downstream of a strong RBS (BBa_B0034) and binds to lead ions in the cytoplasm and decrease its concentration.

Usage and Biology

This is an intermediate part which can be incorporated under a promoter. The pbrD protein is known to sequester lead ions in the cytoplasm of the bacterial cell.

When put under a lead responsive promoter, the part is expected to show dosage dependent sequestration properties.

Construction

"T--IISER-Pune-India--pbrD_Gel.jpeg"

The part was artificially synthesised with corresponding primers that have overlap with GFP sequence. This allows it to be put downstream of the lead dependent biosensor BBa_K1758333. This part has been synthesised with a strong Ribosome Binding Site BBa_B0034 upstream of the coding sequence.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 532
  • 1000
    COMPATIBLE WITH RFC[1000]