Difference between revisions of "Part:BBa K2960003"

Line 4: Line 4:
  
 
This is a composite part consisting of a constitutively-active promoter sequence (J23100), a ribosome binding site (BBa_J61100), the mlrC gene (BBa_k2960008), the TorA tat sequence (BBa_K1012002), a 3x FLAG tag (BBa_K823034), and a terminator (BBa_B0015).  
 
This is a composite part consisting of a constitutively-active promoter sequence (J23100), a ribosome binding site (BBa_J61100), the mlrC gene (BBa_k2960008), the TorA tat sequence (BBa_K1012002), a 3x FLAG tag (BBa_K823034), and a terminator (BBa_B0015).  
 +
 +
<!-- Add more about the biology of this part here
 +
===Usage and Biology===
  
 
A cassette of enzymes endogenous to Sphingopyxis sp. has been shown to sequentially break down microcystin-LR (Figure 1). The enzymes have been named mlrA, mlrB, mlrC, mlrD, mlrE, and mlrF. MlrC is the third enzyme in the microcystin-degradation pathway. MlrC is assumed to be a metallopeptidase. It cleaves the tetrapeptide intermediate into an Adda amino acid and other smaller peptides. The exact smaller peptides that result are still unknown.  
 
A cassette of enzymes endogenous to Sphingopyxis sp. has been shown to sequentially break down microcystin-LR (Figure 1). The enzymes have been named mlrA, mlrB, mlrC, mlrD, mlrE, and mlrF. MlrC is the third enzyme in the microcystin-degradation pathway. MlrC is assumed to be a metallopeptidase. It cleaves the tetrapeptide intermediate into an Adda amino acid and other smaller peptides. The exact smaller peptides that result are still unknown.  
Line 21: Line 24:
 
Figure 1. Schematic of TorA twin-argenine translocation pathway altered to transport folded mlr proteins.
 
Figure 1. Schematic of TorA twin-argenine translocation pathway altered to transport folded mlr proteins.
  
<!-- Add more about the biology of this part here
 
===Usage and Biology===
 
  
 
<!-- -->
 
<!-- -->

Revision as of 01:34, 21 October 2019


mlrC with TorA tat Sequence

This is a composite part consisting of a constitutively-active promoter sequence (J23100), a ribosome binding site (BBa_J61100), the mlrC gene (BBa_k2960008), the TorA tat sequence (BBa_K1012002), a 3x FLAG tag (BBa_K823034), and a terminator (BBa_B0015).

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 7
    Illegal NheI site found at 30
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 722
    Illegal BglII site found at 932
    Illegal BamHI site found at 1467
    Illegal XhoI site found at 1211
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]