Difference between revisions of "Part:BBa K3196025"
 
(3 intermediate revisions by 2 users not shown)
Line 3: Line 3:
 
<partinfo>BBa_K3196025 short</partinfo>
 
<partinfo>BBa_K3196025 short</partinfo>
  
−
The SUC2 gene of S. cerevisiae, encoding invertase was designed to codon preference of P. pastoris excluding the sequence of the N-terminal pre-pro-sequence signal peptide and His-tag in the C terminus. VP can catalyze pectin.
+
The SUC2 gene of S. cerevisiae, encoding invertase was designed to codon preference of P. pastoris excluding the sequence of the N-terminal pre-pro-sequence signal peptide and His-tag in the C terminus. VP can catalyze lignin.
  
 
<h1>'''Characterization'''</h1>
 
<h1>'''Characterization'''</h1>
 
This is a four section for degrade and transfer lignin part.The expression of SUC2 gene is a kind of Sucrose transferase [1], and its signal peptide can help the protein out cells. We use this signal peptide raise the efficiency of VP’s transformation.[[ File:T--HUST--China--2019-SUC2VP.jpg‎|400px|thumb|center|Figure1. T--HUST--China--2019-SUC2VP]]
 
This is a four section for degrade and transfer lignin part.The expression of SUC2 gene is a kind of Sucrose transferase [1], and its signal peptide can help the protein out cells. We use this signal peptide raise the efficiency of VP’s transformation.[[ File:T--HUST--China--2019-SUC2VP.jpg‎|400px|thumb|center|Figure1. T--HUST--China--2019-SUC2VP]]
  
−
<h1>'''DNA Gel Electrophoretic'''</h1>
 
−
After we link SUC2 and VP successfully, we run the PCR with an intention to confirm the expression of VP. As the figure shows, we get the genetic stripe about xxx bp which means the PCR is successful.
 
−
[[File:Kozak_sequence.png ‎|400px|thumb|center|Figure1. This figure shows the most possible kozak consensus sequence.]]
 
  
−
<h1>'''SDS-PAGE'''</h1>
+
<h1>'''Reference'''</h1><!-- -->
−
We run the SDS-PAGE to check whether SUC2 help the enzyme transfer to the extracellular. As the figure shows, we get the protein type about xxx bp which means the SDS-PAGE is successful.
+
[1]Cloning and expression of Saccharomyces cerevisiae SUC2 gene in yeast platform and characterization of recombinant enzyme biochemical properties. Nooshin Mohandesi, Seyed Omid Ranaei Siadat, Kamahldin Haghbeen, Ardeshir Hesampour Received: 8 February 2016 / Accepted: 25 May 2016 / Published online: 8 June 2016 The Author(s) 2016.  
−
[[File:Kozak_sequence.png ‎|400px|thumb|center|Figure1. This figure shows the most possible kozak consensus sequence.]]
+
  
−
<h1>'''Enzyme Activity'''</h1>
 
−
We use manganese and hydrogen peroxide to detect the enzyme activity. As the figure shows, the solution turns xxx, which confirm the enzyme activity.
 
−
[[File:Kozak_sequence.png ‎|400px|thumb|center|Figure1. This figure shows the most possible kozak consensus sequence.]]
 
−
 
−
<h1>'''Reference'''</h1><!-- -->
 
−
[1]Cloning and expression of Saccharomyces cerevisiae SUC2 gene in yeast platform and characterization of recombinant enzyme biochemical properties. Nooshin Mohandesi,  Seyed Omid Ranaei Siadat, Kamahldin Haghbeen, Ardeshir Hesampour Received: 8 February 2016 / Accepted: 25 May 2016 / Published online: 8 June 2016 The Author(s) 2016. This article is published with open access at Springerlink.com<span class='h3bb'>Sequence and Features</span>
 
 
<partinfo>BBa_K3196025 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K3196025 SequenceAndFeatures</partinfo>
−
 
  
 
<!-- Uncomment this to enable Functional Parameter display  
 
<!-- Uncomment this to enable Functional Parameter display  

Latest revision as of 10:40, 20 October 2019


AOX1-Kozak-SUC2-VP-His tag-AOX1 Terminator

The SUC2 gene of S. cerevisiae, encoding invertase was designed to codon preference of P. pastoris excluding the sequence of the N-terminal pre-pro-sequence signal peptide and His-tag in the C terminus. VP can catalyze lignin.

Characterization

This is a four section for degrade and transfer lignin part.The expression of SUC2 gene is a kind of Sucrose transferase [1], and its signal peptide can help the protein out cells. We use this signal peptide raise the efficiency of VP’s transformation.
Figure1. T--HUST--China--2019-SUC2VP


Reference

[1]Cloning and expression of Saccharomyces cerevisiae SUC2 gene in yeast platform and characterization of recombinant enzyme biochemical properties. Nooshin Mohandesi, Seyed Omid Ranaei Siadat, Kamahldin Haghbeen, Ardeshir Hesampour Received: 8 February 2016 / Accepted: 25 May 2016 / Published online: 8 June 2016 The Author(s) 2016.


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 937
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]