Difference between revisions of "Part:BBa K2983022"
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Blue circle : overhang formed by SapI after cutting (ATG) | Blue circle : overhang formed by SapI after cutting (ATG) | ||
− | + | Orange circle: overhang formed by BasI after cutting (AATG) | |
Revision as of 14:04, 19 October 2019
Loop C-Alpha
This part is a Loop Type IIS Golden gate adapter that contains a BsaI and a SapI restriction sites.
Usage and Biology
The Loop Type IIS cloning sites (triangles in figure 1) are a combination of BsaI and SapI restriction sites each with different cutting sites that generate well defined overhangs (circles in Figure 1).The sequence of the loop C-Alpha is as fellow : GGTCTCAAATGAATGTGAAGAGC
Blue triangle: SapI fixation site (GCTCTTC)
Red triangle : BsaI fixation site (GAGACC)
Blue circle : overhang formed by SapI after cutting (ATG)
Orange circle: overhang formed by BasI after cutting (AATG)
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI site found at 1
Illegal SapI.rc site found at 17