Difference between revisions of "Part:BBa K3114008"
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<partinfo>BBa_K3114008 short</partinfo> | <partinfo>BBa_K3114008 short</partinfo> | ||
− | Chlorophyll B Reductase is a naturally occurring plant enzyme, encoded by the gene NYC1, which catalyzes the first step of chlorophyll b degradation (Horie et al. 2009). | + | Chlorophyll B Reductase is a naturally occurring plant enzyme, encoded by the gene NYC1, which catalyzes the first step of chlorophyll b degradation (Horie et al. 2009). With the cofactor NADPH, chlorophyll b reductase converts chlorophyll b into 7-Hydroxymethyl Chlorophyll a. |
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==Collection of Parts== | ==Collection of Parts== | ||
− | This part was designed to be Golden Gate compatible with | + | This part was designed to be Golden Gate compatible with certain Golden Gate parts in iGEM Calgary's 2019 part collection including the following: <br/> |
1. DsbA signal peptide - Bba_K3114000 https://parts.igem.org/Part:BBa_K3114000<br/> | 1. DsbA signal peptide - Bba_K3114000 https://parts.igem.org/Part:BBa_K3114000<br/> | ||
2. MalE signal peptide - Bba_K3114001 https://parts.igem.org/Part:BBa_K3114001<br/> | 2. MalE signal peptide - Bba_K3114001 https://parts.igem.org/Part:BBa_K3114001<br/> |
Revision as of 04:10, 17 October 2019
Chlorophyll B Reductase (CBR)
Chlorophyll B Reductase is a naturally occurring plant enzyme, encoded by the gene NYC1, which catalyzes the first step of chlorophyll b degradation (Horie et al. 2009). With the cofactor NADPH, chlorophyll b reductase converts chlorophyll b into 7-Hydroxymethyl Chlorophyll a.
Usage and Biology
BBa_K3114008 is a golden gate compatible part which allows insertion of the NYC1 gene into genetic circuits to express the enzyme chlorophyll B reductase.
Collection of Parts
This part was designed to be Golden Gate compatible with certain Golden Gate parts in iGEM Calgary's 2019 part collection including the following:
1. DsbA signal peptide - Bba_K3114000 https://parts.igem.org/Part:BBa_K3114000
2. MalE signal peptide - Bba_K3114001 https://parts.igem.org/Part:BBa_K3114001
3. OmpA signal peptide - Bba_K3114002 https://parts.igem.org/Part:BBa_K3114002
4. PhoA signal peptide - Bba_K3114003 https://parts.igem.org/Part:BBa_K3114003
5. Tat signal peptide - Bba_K3114004 https://parts.igem.org/Part:BBa_K3114004
6. TorA signal peptide - Bba_K3114005 https://parts.igem.org/Part:BBa_K3114005
7. Double Terminator - Bba_K3114013 https://parts.igem.org/Part:BBa_K3114013
References
Horie, Y., Ito, H., Kusaba, M., Tanaka, R., & Tanaka, A. (2009). Participation of chlorophyll b reductase in the initial step of the degradation of light-harvesting chlorophyll a/b-protein complexes in Arabidopsis. Journal of Biological Chemistry, 284(26), 17449-17456.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21INCOMPATIBLE WITH RFC[21]Illegal XhoI site found at 4
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI site found at 1
Illegal BsaI.rc site found at 1061