Difference between revisions of "Part:BBa K3114008"

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===Usage and Biology===
 
===Usage and Biology===
 
BBa_K3114008 is a golden gate compatible part which allows insertion of the NYC1 gene into genetic circuits to express the enzyme chlorophyll B reductase.
 
BBa_K3114008 is a golden gate compatible part which allows insertion of the NYC1 gene into genetic circuits to express the enzyme chlorophyll B reductase.
 +
 +
==Collection of Parts==
 +
This part was designed to be Golden Gate compatible with all of the other Golden Gate parts in iGEM Calgary's 2019 part collection including the following: <br/>
 +
1. DsbA signal peptide - Bba_K3114000 https://parts.igem.org/Part:BBa_K3114000<br/>
 +
2. MalE signal peptide - Bba_K3114001 https://parts.igem.org/Part:BBa_K3114001<br/>
 +
3. OmpA signal peptide - Bba_K3114002 https://parts.igem.org/Part:BBa_K3114002<br/>
 +
4. PhoA signal peptide - Bba_K3114003 https://parts.igem.org/Part:BBa_K3114003<br/>
 +
5. Tat signal peptide  - Bba_K3114004 https://parts.igem.org/Part:BBa_K3114004<br/>
 +
6. TorA signal peptide - Bba_K3114005 https://parts.igem.org/Part:BBa_K3114005<br/>
 +
7. Double Terminator  - Bba_K3114013 https://parts.igem.org/Part:BBa_K3114013
  
  

Revision as of 04:04, 17 October 2019


Chlorophyll B Reductase (CBR)

Chlorophyll B Reductase is a naturally occurring plant enzyme, encoded by the gene NYC1, which catalyzes the first step of chlorophyll b degradation (Horie et al. 2009). Specifically, chlorophyll b reductase converts chlorophyll b into 7-Hydroxymethyl Chlorophyll a.


Usage and Biology

BBa_K3114008 is a golden gate compatible part which allows insertion of the NYC1 gene into genetic circuits to express the enzyme chlorophyll B reductase.

Collection of Parts

This part was designed to be Golden Gate compatible with all of the other Golden Gate parts in iGEM Calgary's 2019 part collection including the following:
1. DsbA signal peptide - Bba_K3114000 https://parts.igem.org/Part:BBa_K3114000
2. MalE signal peptide - Bba_K3114001 https://parts.igem.org/Part:BBa_K3114001
3. OmpA signal peptide - Bba_K3114002 https://parts.igem.org/Part:BBa_K3114002
4. PhoA signal peptide - Bba_K3114003 https://parts.igem.org/Part:BBa_K3114003
5. Tat signal peptide - Bba_K3114004 https://parts.igem.org/Part:BBa_K3114004
6. TorA signal peptide - Bba_K3114005 https://parts.igem.org/Part:BBa_K3114005
7. Double Terminator - Bba_K3114013 https://parts.igem.org/Part:BBa_K3114013


References

Horie, Y., Ito, H., Kusaba, M., Tanaka, R., & Tanaka, A. (2009). Participation of chlorophyll b reductase in the initial step of the degradation of light-harvesting chlorophyll a/b-protein complexes in Arabidopsis. Journal of Biological Chemistry, 284(26), 17449-17456.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal XhoI site found at 4
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 1
    Illegal BsaI.rc site found at 1061