Difference between revisions of "Part:BBa K2933001"

(Enzymatic determination)
Line 50: Line 50:
  
 
====Determination of the mikkelsen curve====
 
====Determination of the mikkelsen curve====
 +
 +
===Hydrolysis efficiency of different antibiotics===
 +
  
 
===Hydrolysis efficiency of different antibiotics===
 
===Hydrolysis efficiency of different antibiotics===

Revision as of 13:19, 3 September 2019


subclass B1 metallo-beta-lactamase NDM-23, codon optimized in E. coli

NDM-23 is a type of subclass B metal beta-lactamases, which is derived from NDM-1 mutation. The beta lactamases of the NDM family can hydrolyze almost all available beta lactam antibiotics (except aztreonam) clinically, including the broad-spectrum antibiotic carbapenems. Because of the extensive substrate profile of this enzyme, the clinical strains carrying it become a great threat to human life and health.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


Usage and Biology

References

Expression and purification

Pre-expression:
The bacteria were cultured in 5mL LB liquid medium with ampicillin in 37℃ overnight. After taking samples, we transfer them into 1L LB medium with ampicillin.

Massive expressing:
After 4 hours culturing in 37℃ in bottles, we used 500μM IPTG induced in 16℃ for 8-12h.

Purification of GST fusion proteins:

Anion exchange column:

Gel filtration chromatography:

Enzyme activity determination

Determination of enzyme concentration

Determination of the buffer composition

Determination of substrate concentration

Determination of the mikkelsen curve

Hydrolysis efficiency of different antibiotics

Hydrolysis efficiency of different antibiotics