Difference between revisions of "Part:BBa K2587010"
(2 intermediate revisions by 2 users not shown) | |||
Line 3: | Line 3: | ||
<partinfo>BBa_K2587010 short</partinfo> | <partinfo>BBa_K2587010 short</partinfo> | ||
− | <i>trzC</i> | + | <i>trzC</i> encodes the ammelide aminohydrolase, which cleaves the amino group from ammelide to convert it to cyanuric acid (cyanurate). It could be used as the third step of the melamine degradation as descriped in Shaw <i>at al.</i>, 2016<sup>1</sup>. The sequence is codon optimized for <i>Escherichia coli</i>. |
<!-- Add more about the biology of this part here | <!-- Add more about the biology of this part here | ||
Line 20: | Line 20: | ||
<p><strong><h4>References</h4></strong></p> | <p><strong><h4>References</h4></strong></p> | ||
− | <p>Shaw, A. Joe, et al. "Metabolic engineering of microbial competitive advantage for industrial fermentation processes." Science 353.6299 (2016): 583-586.<br> | + | <p><strong>(1)</strong> Shaw, A. Joe, et al. "Metabolic engineering of microbial competitive advantage for industrial fermentation processes." Science 353.6299 (2016): 583-586.<br> |
http://science.sciencemag.org/content/353/6299/583?casa_token=_q3c5eJ3Gv4AAAAA:3HmgrxE_r8XSnR8YUtF3cLZ9I-luClCJEJcwxy6E_J711AgFcrN7i-ozHCnV_HZQmxteX12dXxw5rMc</p> | http://science.sciencemag.org/content/353/6299/583?casa_token=_q3c5eJ3Gv4AAAAA:3HmgrxE_r8XSnR8YUtF3cLZ9I-luClCJEJcwxy6E_J711AgFcrN7i-ozHCnV_HZQmxteX12dXxw5rMc</p> |
Latest revision as of 23:52, 17 October 2018
trzC_opt
trzC encodes the ammelide aminohydrolase, which cleaves the amino group from ammelide to convert it to cyanuric acid (cyanurate). It could be used as the third step of the melamine degradation as descriped in Shaw at al., 20161. The sequence is codon optimized for Escherichia coli.
Sequence and Features
Assembly Compatibility:
- 10INCOMPATIBLE WITH RFC[10]Illegal XbaI site found at 11
Illegal SpeI site found at 18
Illegal SpeI site found at 1287 - 12INCOMPATIBLE WITH RFC[12]Illegal SpeI site found at 18
Illegal SpeI site found at 1287
Illegal NotI site found at 2
Illegal NotI site found at 1294 - 21COMPATIBLE WITH RFC[21]
- 23INCOMPATIBLE WITH RFC[23]Illegal XbaI site found at 11
Illegal SpeI site found at 18
Illegal SpeI site found at 1287 - 25INCOMPATIBLE WITH RFC[25]Illegal XbaI site found at 11
Illegal SpeI site found at 18
Illegal SpeI site found at 1287 - 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI site found at 25
Illegal BsaI.rc site found at 1280
References
(1) Shaw, A. Joe, et al. "Metabolic engineering of microbial competitive advantage for industrial fermentation processes." Science 353.6299 (2016): 583-586.
http://science.sciencemag.org/content/353/6299/583?casa_token=_q3c5eJ3Gv4AAAAA:3HmgrxE_r8XSnR8YUtF3cLZ9I-luClCJEJcwxy6E_J711AgFcrN7i-ozHCnV_HZQmxteX12dXxw5rMc