Difference between revisions of "Part:BBa K2708003"

 
 
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<partinfo>BBa_K2708003 short</partinfo>
 
<partinfo>BBa_K2708003 short</partinfo>
  
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<!-- Add more about the biology of this part here
 
<!-- Add more about the biology of this part here
 
===Usage and Biology===
 
===Usage and Biology===
  
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===Characterizing Part:===
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<p>Here's a map of its gene sequencing,99% are consistent.</p>
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[[Image: T--BIT--BIT2018_registry-K270800301.png |center|850px|]]
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<br>
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<p >The Genes line consists of the promoter, the S-adenosyl methionine riboswitch and promoter E0840.The plasmid is converted into E.coli to measure green fluorescence to verify the riboswitch's function.When the circuit is activated by the promoter, the terminating substructure at the end of the SAM ribose switch cannot be formed, making the circuit express downward to produce GFP fluorescent protein.While the molecule SAM binds to the SAM riboswitch, the end of the SAM riboswitch forms a terminating substructure that terminates the circuit and fails to express the fluorescent protein.</p>
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<br>
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<p>Its size was 1176bp, and after adding the enzyme cutting sites at both ends, it was between 1500bp and 2000bp. Agarose gel electrophoresis showed the bands correctly.</p>
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[[Image: T--BIT--BIT2018_registry-K270800318.png |center|]]
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<br>
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<!-- -->
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===Experiment Results :===
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<p>1.In the higher SAM concentration range:
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The experimental results showed that the higher the concentration of SAM, the lower the fluorescence and OD600 value, indicating the response of the SAM switch to SAM, which led to the inhibition of fluorescence expression behind the circuit ,as expected.</p>
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[[Image: T--BIT--BIT2018_registry-K2708003-03.png |center|600px|]]
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<br>
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[[Image: T--BIT--BIT2018_registry-K2708003-04.png |center|600px|]]
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<br>
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<p>2.In the lower SAM concentration range:
 +
The experimental results showed that the higher the concentration of SAM, the lower the fluorescence and OD600 value, indicating the response of the SAM switch to SAM, which led to the inhibition of fluorescence expression behind the circuit ,as expected.</p>
 +
 +
 +
[[Image: T--BIT--BIT2018_registry-K2708003-05.png |center|600px|]]
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<br>
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[[Image: T--BIT--BIT2018_registry-K2708003-06.png |center|600px|]]
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<br>
 
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<span class='h3bb'>Sequence and Features</span>
 
<span class='h3bb'>Sequence and Features</span>

Latest revision as of 21:42, 17 October 2018


Promoter and S-adenosyl methionine riboswitch, GFP fluorescent expression system.


Characterizing Part:

Here's a map of its gene sequencing,99% are consistent.

T--BIT--BIT2018 registry-K270800301.png


The Genes line consists of the promoter, the S-adenosyl methionine riboswitch and promoter E0840.The plasmid is converted into E.coli to measure green fluorescence to verify the riboswitch's function.When the circuit is activated by the promoter, the terminating substructure at the end of the SAM ribose switch cannot be formed, making the circuit express downward to produce GFP fluorescent protein.While the molecule SAM binds to the SAM riboswitch, the end of the SAM riboswitch forms a terminating substructure that terminates the circuit and fails to express the fluorescent protein.


Its size was 1176bp, and after adding the enzyme cutting sites at both ends, it was between 1500bp and 2000bp. Agarose gel electrophoresis showed the bands correctly.

T--BIT--BIT2018 registry-K270800318.png



Experiment Results :

1.In the higher SAM concentration range: The experimental results showed that the higher the concentration of SAM, the lower the fluorescence and OD600 value, indicating the response of the SAM switch to SAM, which led to the inhibition of fluorescence expression behind the circuit ,as expected.

T--BIT--BIT2018 registry-K2708003-03.png


T--BIT--BIT2018 registry-K2708003-04.png


2.In the lower SAM concentration range: The experimental results showed that the higher the concentration of SAM, the lower the fluorescence and OD600 value, indicating the response of the SAM switch to SAM, which led to the inhibition of fluorescence expression behind the circuit ,as expected.


T--BIT--BIT2018 registry-K2708003-05.png


T--BIT--BIT2018 registry-K2708003-06.png


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 7
    Illegal NheI site found at 30
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 963