Difference between revisions of "Part:BBa K2839000"
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TALE1 stabilized promoter driving sfGFP expression | TALE1 stabilized promoter driving sfGFP expression | ||
− | + | Talesp1 pupsp1 Stabilized Device | |
+ | |||
+ | |||
+ | Contents: | ||
+ | Short Description | ||
+ | Biology and Functionality | ||
+ | Usage in our Project | ||
+ | Illegal Sites Removal | ||
+ | Cloning Strategy | ||
+ | Results, Characterization | ||
+ | Potential Applications | ||
+ | References | ||
+ | |||
+ | 1.Short description: | ||
+ | |||
+ | This part consists of a TAL Effector (TALEsp1), a TALEsp1-stabilized promoter (pupsp1) and a fluorescent marker (sfGFP). | ||
+ | This part was originally designed by Thomas Hale Segall-Shapiro (Shapiro et al) and iGEM Thessaloniki modified it to exclude 2 PstI recognition sites, thus making it RFC[10] compatible .It can be used to achieve stabilised expression of the sfGFP marker, decoupled from gene/plasmid copy number. | ||
+ | |||
+ | |||
+ | |||
+ | Basic Part Name | ||
+ | Registry link | ||
+ | Type | ||
+ | Function | ||
+ | L2S2P21 | ||
+ | BBa_K1401006 | ||
+ | Terminator | ||
+ | Terminates Transcription | ||
+ | PT7A1w2 | ||
+ | BBa_K2839021 | ||
+ | Promoter | ||
+ | Transcription Initiation | ||
+ | SarJ | ||
+ | BBa_K2839022 | ||
+ | Insulator | ||
+ | |||
+ | |||
+ | RBSsp1 | ||
+ | BBa_K2753036 | ||
+ | RBS | ||
+ | Recognized by ribosome and initiates translation | ||
+ | TALEsp1 | ||
+ | BBa_K2839027 | ||
+ | Coding Sequence | ||
+ | Binds to the PUPsp1 promoter and inhibits RNAP binding | ||
+ | ECK-12 0029600 | ||
+ | BBa_K2486006 | ||
+ | Terminator | ||
+ | Terminates Transcription | ||
+ | PUPsp1 | ||
+ | BBa_K2839025 | ||
+ | Promoter | ||
+ | Transcription Initiation | ||
+ | RiboJ | ||
+ | BBa_K1679042 | ||
+ | Insulator | ||
+ | |||
+ | |||
+ | B0032 | ||
+ | BBa_B0032 | ||
+ | RBS | ||
+ | Ribosome Binding Site | ||
+ | sfGFP | ||
+ | BBa_K1893032 | ||
+ | Coding Sequence | ||
+ | Fluorescence Marker | ||
+ | B0015 | ||
+ | BBa_B0015 | ||
+ | Terminator | ||
+ | Terminates Transcription | ||
+ | |||
+ | |||
+ | |||
+ | |||
<!-- Add more about the biology of this part here | <!-- Add more about the biology of this part here |
Revision as of 22:02, 15 October 2018
TALEsp1-Pupsp1 stabilized promoter
TALE1 stabilized promoter driving sfGFP expression
Talesp1 pupsp1 Stabilized Device
Contents:
Short Description
Biology and Functionality
Usage in our Project
Illegal Sites Removal
Cloning Strategy
Results, Characterization
Potential Applications
References
1.Short description:
This part consists of a TAL Effector (TALEsp1), a TALEsp1-stabilized promoter (pupsp1) and a fluorescent marker (sfGFP). This part was originally designed by Thomas Hale Segall-Shapiro (Shapiro et al) and iGEM Thessaloniki modified it to exclude 2 PstI recognition sites, thus making it RFC[10] compatible .It can be used to achieve stabilised expression of the sfGFP marker, decoupled from gene/plasmid copy number.
Basic Part Name Registry link Type Function L2S2P21 BBa_K1401006 Terminator Terminates Transcription PT7A1w2 BBa_K2839021 Promoter Transcription Initiation SarJ BBa_K2839022 Insulator
RBSsp1
BBa_K2753036
RBS
Recognized by ribosome and initiates translation
TALEsp1
BBa_K2839027
Coding Sequence
Binds to the PUPsp1 promoter and inhibits RNAP binding
ECK-12 0029600
BBa_K2486006
Terminator
Terminates Transcription
PUPsp1
BBa_K2839025
Promoter
Transcription Initiation
RiboJ
BBa_K1679042
Insulator
B0032
BBa_B0032
RBS
Ribosome Binding Site
sfGFP
BBa_K1893032
Coding Sequence
Fluorescence Marker
B0015
BBa_B0015
Terminator
Terminates Transcription
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21INCOMPATIBLE WITH RFC[21]Illegal XhoI site found at 2734
Illegal XhoI site found at 3677 - 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal AgeI site found at 1707
- 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI site found at 23