Difference between revisions of "Part:BBa K2629003:Experience"

Line 9: Line 9:
 
<h1> Test A: <I> Is this part able to detect the target for which it has been designed ?</I> </h1><br>
 
<h1> Test A: <I> Is this part able to detect the target for which it has been designed ?</I> </h1><br>
  
mettre schema
+
<center> https://static.igem.org/mediawiki/parts/d/d6/T--grenoble-alpes--A1.png </center>
  
 
<p> Unfortunately, results were too heterogenous to bring any conclusions. Indeed, the number of colonies, for the 1:100 and 1:200 ratios, expected was not good enought (there is a possibility that the detector was badly digested and was consequently transformed). </p>
 
<p> Unfortunately, results were too heterogenous to bring any conclusions. Indeed, the number of colonies, for the 1:100 and 1:200 ratios, expected was not good enought (there is a possibility that the detector was badly digested and was consequently transformed). </p>

Revision as of 14:06, 23 September 2018

Experiments were done on a plasmid in which the probe has been inserted, thanks the Gibson technic, in psB1C3-BBa_J04450.

Results of the clonning of the BFP gene instead of BBa_J04450 and the probe clonning

sequencage


Test A: Is this part able to detect the target for which it has been designed ?


T--grenoble-alpes--A1.png

Unfortunately, results were too heterogenous to bring any conclusions. Indeed, the number of colonies, for the 1:100 and 1:200 ratios, expected was not good enought (there is a possibility that the detector was badly digested and was consequently transformed).

Test B: Is this part able to detect specifically the target for which it has been designed ?


In order to evaluate the specificity of the detector part of BBa_K2629003, different “false target” sequences have been synthesized. An algorithm was made by iGEM Grenoble Alpes 2017 to give random sequences, more or less homologous to the original target with 5%, 15%, 25% and 50% randomly modified pairs of nucleotides (length is kept 36bp).
The algorithm can be found here :


T--grenoble-alpes--RESalgo.png

Unfortunately, we did not have the opportunity and the time to carry out these experiments.

User Reviews

UNIQc0fa168abfc26927-partinfo-00000000-QINU UNIQc0fa168abfc26927-partinfo-00000001-QINU