Difference between revisions of "Part:BBa K2629003:Experience"
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<p>Experiments were done on a plasmid in which the probe has been inserted, thanks the Gibson technic, in psB1C3-BBa_J04450. </p> | <p>Experiments were done on a plasmid in which the probe has been inserted, thanks the Gibson technic, in psB1C3-BBa_J04450. </p> | ||
| − | <h1> Results of the clonning of the BFP gene instead of BBa_J04450 </h1> | + | <h1> Results of the clonning of the BFP gene instead of BBa_J04450 and the probe clonning </h1> |
sequencage | sequencage | ||
Revision as of 13:46, 23 September 2018
Experiments were done on a plasmid in which the probe has been inserted, thanks the Gibson technic, in psB1C3-BBa_J04450.
Contents
Results of the clonning of the BFP gene instead of BBa_J04450 and the probe clonning
sequencage
Test A: Is this part able to detect the target for which it has been designed ?
mettre schema
Unfortunately, results were too heterogenous to bring any conclusions. Indeed, the number of colonies, for the 1:100 and 1:200 ratios, expected was not good enought (there is a possibility that the detector was badly digested and was consequently transformed).
Test B: Is this part able to detect specifically the target for which it has been designed ?
In order to evaluate the specificity of the detector part of BBa_K2629003, different “false target” sequences have been synthesized.
An algorithm was made by iGEM Grenoble Alpes 2017 to give random sequences, more or less homologous to the original target with 5%, 15%, 25% and 50% randomly modified pairs of nucleotides (length is kept 36bp).
The algorithm can be found here :
Unfortunately, we did not have the opportunity and the time to carry out these experiments.
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UNIQ8338cfe02339d2f1-partinfo-00000000-QINU UNIQ8338cfe02339d2f1-partinfo-00000001-QINU