Difference between revisions of "Part:BBa K2213005"
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− | The PduD(1-20) domain is sufficient to localise the part into a recombinant ethanolamine utilisation (Eut) or 1, 2 propanediol (Pdu) bacterial microcompartment (Jakobson et al., 2015). The mCherry allows monitoring the subcellular location of the part. The cgPPK2 domain encodes a soluble class II polyphosphate kinase from <i>Corynebacterium glutamicim</i> with a specific activity 30-fold greater than that of <i>E. coli</i>(Lindner et al., 2007;Kornberg and Simms, 1956). The part also contains a C-terminal hexa-histidine tag to allow purification with immobilised metal ion affinity chromatography. | + | The N-terminal PduD(1-20) domain (<b>Figure 1</b>) is sufficient to localise the part into a recombinant ethanolamine utilisation (Eut) or 1, 2 propanediol (Pdu) bacterial microcompartment (Jakobson et al., 2015). The mCherry allows monitoring the subcellular location of the part. The cgPPK2 domain encodes a soluble class II polyphosphate kinase from <i>Corynebacterium glutamicim</i> with a specific activity 30-fold greater than that of <i>E. coli</i>(Lindner et al., 2007;Kornberg and Simms, 1956). The part also contains a C-terminal hexa-histidine tag to allow purification with immobilised metal ion affinity chromatography. |
− | The part was overexpressed in a BL21 (DE3) strain of <i>E. coli</i> under the control of a T7 promoter and purified to a certain degree (<b>Figure | + | The part was overexpressed in a BL21 (DE3) strain of <i>E. coli</i> under the control of a T7 promoter and purified to a certain degree (<b>Figure 2</b>) |
+ | |||
+ | (<b>Figure 2:</b>) SDS-PAGE analysis of the purification stages of the construct. Black arrows indicate bands with a molecular mass corresponding to the construct (66 kDa). Ladder: Precision Plus Protein™ (Bio Rad) | ||
https://static.igem.org/mediawiki/parts/9/92/MCh_PPK_SDS_PAGE_gel_annotated.png | https://static.igem.org/mediawiki/parts/9/92/MCh_PPK_SDS_PAGE_gel_annotated.png | ||
Revision as of 23:46, 1 November 2017
PduD(1-20)_mCherry_cgPPK2_His6
Figure 1: The overall architecture of the construct
The N-terminal PduD(1-20) domain (Figure 1) is sufficient to localise the part into a recombinant ethanolamine utilisation (Eut) or 1, 2 propanediol (Pdu) bacterial microcompartment (Jakobson et al., 2015). The mCherry allows monitoring the subcellular location of the part. The cgPPK2 domain encodes a soluble class II polyphosphate kinase from Corynebacterium glutamicim with a specific activity 30-fold greater than that of E. coli(Lindner et al., 2007;Kornberg and Simms, 1956). The part also contains a C-terminal hexa-histidine tag to allow purification with immobilised metal ion affinity chromatography.
The part was overexpressed in a BL21 (DE3) strain of E. coli under the control of a T7 promoter and purified to a certain degree (Figure 2)
(Figure 2:) SDS-PAGE analysis of the purification stages of the construct. Black arrows indicate bands with a molecular mass corresponding to the construct (66 kDa). Ladder: Precision Plus Protein™ (Bio Rad)
References
Jakobson, C., Kim, E., Slininger, M., Chien, A. and Tullman-Ercek, D. (2015). Localization of Proteins to the 1,2-Propanediol Utilization Microcompartment by Non-native Signal Sequences Is Mediated by a Common Hydrophobic Motif. Journal of Biological Chemistry, 290(40), pp.24519-24533.
Lindner, S., Vidaurre, D., Willbold, S., Schoberth, S. and Wendisch, V. (2007). NCgl2620 Encodes a Class II Polyphosphate Kinase in Corynebacterium glutamicum. Applied and Environmental Microbiology, 73(15), pp.5026-5033.
Kornberg, A., Kornberg, S. and Simms, E. (1956). Metaphosphate synthesis by an enzyme from Escherichia coli. Biochimica et Biophysica Acta, 20, pp.215-227.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal AgeI site found at 865
- 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI site found at 103
Illegal SapI.rc site found at 1544