Difference between revisions of "Part:BBa K2273012"
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The kinase reacts to the accumulation of ComX by phosphorylating the response regulator ComA <b>(c)</b> which then works as a transcription factor by binding to several promoters and enhancing their activity <b>(d)</b>. | The kinase reacts to the accumulation of ComX by phosphorylating the response regulator ComA <b>(c)</b> which then works as a transcription factor by binding to several promoters and enhancing their activity <b>(d)</b>. | ||
<a target="_blank" href="https://www.ncbi.nlm.nih.gov/pubmed/12576575">(Hamoen <i>et al.</i>)</a><br> | <a target="_blank" href="https://www.ncbi.nlm.nih.gov/pubmed/12576575">(Hamoen <i>et al.</i>)</a><br> | ||
− | The most important promoter regulated by ComA and involved in competence development is the promoter of the <i>srfA</i> operon (P<sub><i>srfA</i></sub>, <a href="https://parts.igem.org/Part:BBa_K2273000">BBa_K2273000</a>). This operon contains not only genes for the production of the antibiotic surfactin <b>(e)</b> but also for ComS <b>(f)</b>, another small peptide that prevents the degradation of the autoregulated transcription factor ComK <b>(g)</b>. ComK activates expression of more than 100 genes, including <i>comG</i>, that is part of the transformation machinery <b>(h)</b> <a target="_blank" href="https://www.ncbi.nlm.nih.gov/pubmed/16091051">(Comella <i>et al.</i>,</a><a target="_blank" href="https://www.ncbi.nlm.nih.gov/pubmed/14762007">Susanna <i>et al.</i>)</a>. Consequently, <i>B. subtilis</i> can take up DNA from the environment either as direct nutrient source or incorporate the DNA via homologues recombination into its own genome. | + | The most important promoter regulated by ComA and involved in competence development is the promoter of the <i>srfA</i> operon (P<sub><i>srfA</i></sub>, <a href="https://parts.igem.org/Part:BBa_K2273000">BBa_K2273000</a>). This operon contains not only genes for the production of the antibiotic surfactin <b>(e)</b> but also for ComS <b>(f)</b>, another small peptide that prevents the degradation of the autoregulated transcription factor ComK <b>(g)</b>. ComK activates expression of more than 100 genes, including <i>comG</i>, that is part of the transformation machinery <b>(h)</b> <a target="_blank" href="https://www.ncbi.nlm.nih.gov/pubmed/16091051">(Comella <i>et al.</i>,</a><a target="_blank" href="https://www.ncbi.nlm.nih.gov/pubmed/14762007">Susanna <i>et al.</i>)</a>. Consequently, <i>B. subtilis</i> can take up DNA from the environment either as direct nutrient source or incorporate the DNA via homologues recombination into its own genome. |
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<figure style="padding-right:15%; padding-left:15%;"> | <figure style="padding-right:15%; padding-left:15%;"> | ||
− | <img src="https://static.igem.org/mediawiki/parts/ | + | <img src="https://static.igem.org/mediawiki/parts/2/23/T--TU_Dresden--P_Communication_PcomG_Media.png" width="100%" > |
− | <figcaption><p align="justify"><b>Figure 2: Growth (A) and promoter activity of P<sub><i><b> | + | <figcaption><p align="justify"><b>Figure 2: Growth (A) and promoter activity of P<sub><i><b>comG</b></i></sub> (B) in different media.</b> Wild type (WT, pink) and <i>comX</i>-knockout strains (Δ<i>comX</i>, dark blue) contain a P<sub><i>comG</i></sub>-<i>luxABCDE</i> fusion.</p></figcation> |
</figure> | </figure> | ||
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Latest revision as of 14:56, 31 October 2017
PcomG: a ComK-dependent promoter of Bacillus subtilis
Usage and Biology
Figure 2: Growth (A) and promoter activity of PcomG (B) in different media. Wild type (WT, pink) and comX-knockout strains (ΔcomX, dark blue) contain a PcomG-luxABCDE fusion.
The promoter was created and used by TU_Dresden 2017. All assays have been conducted with B. subtilis W168 carrying the promoter fused to the lux operon. Other promoters that haven been evaluated regarding their ComX-dependent activity:
PsrfA | BBa_K2273000 |
PrapA | BBa_K2273001 |
PrapF | BBa_K2273002 |
PcomG | BBa_K2273012 |
PcomK mut | BBa_K2273013 |
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]