Difference between revisions of "Part:BBa K2262013"

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[[File:Inhibition zone Pe-4.png|400px|thumb|center|'''Figure 2.''' The result shows that Pe-4 has no obvious function on affecting the growth of mycelium.]]
 
[[File:Inhibition zone Pe-4.png|400px|thumb|center|'''Figure 2.''' The result shows that Pe-4 has no obvious function on affecting the growth of mycelium.]]
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<p style="padding:1px;font-size:14px"><b>(2) Spore Germination </b></p>
 
<p style="padding:1px;font-size:14px"><b>(2) Spore Germination </b></p>
 
 
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To know whether the anti-fungal peptides can inhibit the germination of spores, we conducted the spore germination experiment.
  
<p style="padding:1px;font-size:14px"><b>(3) Botany Experiment </b></p>
 
  
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<p style="padding:1px;font-size:14px"><b>(3) Botany Experiment </b></p>
 
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In order to test our anti-fungal peptides, we put Pe-4 and negative control, Double-distilled water,  on the flower. The negative control on the left hand and BPe-4 on the right hand. Both sides are infected with Botrytis cinerea. We will check the flower 3 days later whether the flower was affected or not. The result shows that the right side, which was spread on Pe-4, is not infected. It means Pe-4 has an anti-fungal function.
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[[File:Plant Pe-4.png|400px|thumb|center|'''Figure 4.''' The result shows that Pe-4 will affect fungal infection. ]]
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Revision as of 20:16, 30 October 2017


T7 Promoter+RBS+Pe-4

Figure 1. PT7+RBS+Pe-4+terminator

Introduction

      It has been known as an antimicrobial peptide. Its grade given by scoring card, which was created by NCTU_Formosa, shows it may also have an anti-fungal function.

Experiment

1. Fungal Test


(1) Inhibition Zone

      We put some mycelium on a Potato dextrose agar plate, PDA plate, and cultivated it at the point of 20℃ for culturing Botrytis cinerea, the fungi we used, for 2 days. Ensuring the mycelial colony has developed, we dug holes and the different concentrations of Pe-4 and HEPES, as a negative control, were added respectively. The place where peptide been but will appear a hole after 12 ~ 18 hours if the peptide will affect the growth of mycelium. The result shows that the place we put Pe-4 does have obviously different with negative control. It means the peptide has no obvious function on affecting the growth of mycelium.


Figure 2. The result shows that Pe-4 has no obvious function on affecting the growth of mycelium.


(2) Spore Germination

      To know whether the anti-fungal peptides can inhibit the germination of spores, we conducted the spore germination experiment.


(3) Botany Experiment

      In order to test our anti-fungal peptides, we put Pe-4 and negative control, Double-distilled water, on the flower. The negative control on the left hand and BPe-4 on the right hand. Both sides are infected with Botrytis cinerea. We will check the flower 3 days later whether the flower was affected or not. The result shows that the right side, which was spread on Pe-4, is not infected. It means Pe-4 has an anti-fungal function.


Figure 4. The result shows that Pe-4 will affect fungal infection.



2. Cloning

      We put T7 promoter, RBS, and Pe-4 together with pSB1C3 as a backbone. Then we conducted Taq PCR to check the size of the DNA sequence was right. The length of T7 promoter+RBS+Sa-AFP2 is around 100 ~ 200 b.p.. Its PCR product is around 250 ~ 500 b.p..


Figure 5. PT7 + RBS + Pe-4
The DNA sequence length of PT7 + RBS + Pe-4 is around 100 ~ 200 b.p.. The size of its PCR product should be close to 450 ~ 500 b.p..

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]