Difference between revisions of "Part:BBa K2448008"
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<partinfo>BBa_K2448008 short</partinfo> | <partinfo>BBa_K2448008 short</partinfo> | ||
− | This part is an E. coli codon optimized version of the PsiR found in Sinorhizobium meliloti (SMb20483). | + | This part is an E. coli codon optimized version of the PsiR found in ''Sinorhizobium meliloti'' (SMb20483). |
===Usage and Biology=== | ===Usage and Biology=== | ||
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PsiR is a predicted LacI family transcription factor with high affinity for D-Psicose. This means that PsiR will prevent transcription of the regulated promoters in the absence of D-Psicose by binding the consensus sequences before the Transcription Start Site. | PsiR is a predicted LacI family transcription factor with high affinity for D-Psicose. This means that PsiR will prevent transcription of the regulated promoters in the absence of D-Psicose by binding the consensus sequences before the Transcription Start Site. | ||
− | Our team used this transcription factor together with the Sinorhizobium meliloti | + | Our team used this transcription factor together with the ''Sinorhizobium meliloti'' pPsiA or pPsiR promoters ([[Part:BBa_K2448014|BBa_K2448014]] and [[Part:BBa_K2448015|BBa_K2448015]]) to build two Psicose biosensors ([[Part:BBa_K2448030|BBa_K2448030]] and [[Part:BBa_K2448031|BBa_K2448031]]). The results show that PsiR behaved as predicted under and without induction. |
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Revision as of 19:13, 28 October 2017
PsiR from Sinorhizobium meliloti
This part is an E. coli codon optimized version of the PsiR found in Sinorhizobium meliloti (SMb20483).
Usage and Biology
PsiR is a predicted LacI family transcription factor with high affinity for D-Psicose. This means that PsiR will prevent transcription of the regulated promoters in the absence of D-Psicose by binding the consensus sequences before the Transcription Start Site.
Our team used this transcription factor together with the Sinorhizobium meliloti pPsiA or pPsiR promoters (BBa_K2448014 and BBa_K2448015) to build two Psicose biosensors (BBa_K2448030 and BBa_K2448031). The results show that PsiR behaved as predicted under and without induction.
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal AgeI site found at 691
Illegal AgeI site found at 1024 - 1000COMPATIBLE WITH RFC[1000]