Difference between revisions of "Part:BBa K2332011"
Paola handal (Talk | contribs) |
Paola handal (Talk | contribs) |
||
Line 18: | Line 18: | ||
Ultimately we would combine cells expressing this construct with cells expressing [https://parts.igem.org/Part:BBa_K2332014 intimin'-SpyCatcher]. We would then use light to control cell aggregation with high precision. Similar to lithography, structures would be generated layer by layer from a flat surface by exposing a particular radius with blue light (see figure 3). | Ultimately we would combine cells expressing this construct with cells expressing [https://parts.igem.org/Part:BBa_K2332014 intimin'-SpyCatcher]. We would then use light to control cell aggregation with high precision. Similar to lithography, structures would be generated layer by layer from a flat surface by exposing a particular radius with blue light (see figure 3). | ||
− | [[File:3D-printing.png|thumb|center| | + | [[File:3D-printing.png|thumb|center|600px| Figure 3: Blue light induction of cell aggregation. Representation of two cell lines expressing either intimin’-SpyTag or intimin’-SpyCatcher fusion proteins under the control of PBlind under blue-light exposure.]] |
<!-- --> | <!-- --> |
Revision as of 11:06, 25 October 2017
Blue light inducible expression of Intimin'-SpyTag (Pblind Intimin'-SpyTag)
This biobrick is the fusion of a truncated version of Intimin (159kDa), an outer membrane surface protein, and SpyTag (13 amino acids) for the cell surface display of SpyTag under the control of our Pblind, blue light inducible promoter (see Figure 1). To trigger cell adhesion, we decided to make use of the SpyTag and SpyCatcher, two binding partners that form rapid covalent bonds, fused to outer membrane surface proteins (see Figure 2). SpyTag (13 amino acids) and SpyCatcher (138 amino acids, 15 kDa) come from CnaB2 (immunoglobulin-llike collagen adhesin domain) of the FbaB protein, found in the invasive strains of S. pyogenes. The reactive lysine in SpyCatcher forms an isopeptide covalent bond with the aspartate residue in SpyTag. We decided to fuse SpyTag and SpyCatcher to outer membrane surface proteins in distinct cell populations that would then aggregate once mixed together but only post blue light induction (see Figure 3). For blue-light transcriptional induction, cells must also express EL222 (BBa_K2332004).
Usage and Biology
Cells transformed with this construct will express a truncated version of intimin (denoted intimin') fused to SpyTag. As shown in figure 1, Intimin is an outer membrane protein and thus proteins fused to its N termini will be displayed on the cell surface. The reactive aspartate residue (Asp) in SpyTag is able to form a spontaneous and irreversible strong isopeptide bond with the lysine residue (Lys) in SpyCatcher. Thus, when two cell lines expressing either Intimin'-SpyTag or Intimin'-SpyCatcher, are mixed together, cells will aggregate.
Placing Intimin'-SpyTag under the control of Pblind along with the constitutive expression of (EL222), will allow the transcriptional control of the cell surface display of SpyTag through blue-light (465nm). Pblind consists of a fusion of the EL222 DNA binding region and the LuxI promoter (see figure 2). The lux box, a 20bp inverted repeat (LuxR and 3-oxo-C6-HSL complex binding region) from the luxI promoter, was replaced with the 18bp DNA binding region of EL222. In the dark, EL222 is inactive as its N-terminal LOV domain represses its DNA-binding C-terminal HTH domain. Upon blue light exposure (465nm), LOV-HTH interaction is released, allowing it to dimerize and bind its binding region, overlapping the -35 region of the luxI promoter. This ultimately results in the recruitment of RNAP and transcriptional activation. Since light can be controlled easily in space, time and degree, this will enable tight spatiotemporal control of gene expression.
Ultimately we would combine cells expressing this construct with cells expressing intimin'-SpyCatcher. We would then use light to control cell aggregation with high precision. Similar to lithography, structures would be generated layer by layer from a flat surface by exposing a particular radius with blue light (see figure 3).
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal NgoMIV site found at 880
Illegal NgoMIV site found at 1621 - 1000COMPATIBLE WITH RFC[1000]