Difference between revisions of "Characterization of Parts"
(Replacing redirecting link with direct link)
 
(9 intermediate revisions by 4 users not shown)
Line 1: Line 1:
−
==Characterization Projects==
+
This page discusses methods to classify and characterize parts in the Registry.
  
 +
Visit [[Part Types]] to view the actual parts in the Registry<br>
 +
 +
 +
==General Characterization Techniques==
 +
Currently, the most commonly used method of testing parts is through fluorescence assays.  <br>
 +
Protocols for such assays can be found in the following places:
 +
*Endy Lab's Openwetware [protocols] for characterizing parts
 +
*Penn State is also working on characterizing parts using fluorescence
 +
 +
==Characterization Techniques for specific part types==
 +
 +
{| cellspacing="0"
 +
|- valign='top'
 +
|width="66%" |
 +
<div style="width:100%;float: left;">
 +
 +
'''Systems'''
 +
<div style="padding-left: 5em">
 +
 +
[[Image:Part_icon_measurement.png|Measurement]] [[Characterization of Parts/Measurement Systems| Measurement Systems]]
 +
 +
</DIV>
 +
<DIV style='height:7px; width: 100%; background: red; border: 1px solid black;'></DIV>
 +
 +
'''Devices'''
 +
<div style="width: 100%;padding-left: 5em">
 +
{| cellspacing="0"
 +
|- valign='top'
 +
|width="47%"|
 +
 +
[[Image:Part_icon_generator.png|Protein Generator]] [[Characterization of Parts/Protein Generators| Protein Generators]]
 +
 +
[[Image:Part_icon_measurement.png|Measurement]] [[Characterization of Parts/Measurement Devices| Measurement Devices]]
 +
 +
[[Image:Part_icon_inverter.png|Inverter]] [[Characterization of Parts/Inverters|Inverters]]
 +
 +
[[Image:Part_icon_signalling.png]] [[Characterization of Parts/Signalling|Signalling]]
 +
 +
|width="6%"|
 +
|width="47%"|
 +
 +
 +
|}
 +
</DIV>
 +
<DIV style='height:7px; width: 100%; background: red; border: 1px solid black;'></DIV>
 +
 +
'''Parts'''
 +
<div style="padding-left: 5em">
 +
{| cellspacing="0"
 +
|- valign='top'
 +
|width="47%"|
 
[[Image:Part_icon_regulatory.png|Regulatory]] [[Characterization of Parts/Promoters| Promoters]]
 
[[Image:Part_icon_regulatory.png|Regulatory]] [[Characterization of Parts/Promoters| Promoters]]
  
 
[[Image:Part_icon_rbs.png|Ribosome Binding Site]] [[Characterization of Parts/RBS Ribosome Binding Sites| RBS Ribosome Binding Sites]]
 
[[Image:Part_icon_rbs.png|Ribosome Binding Site]] [[Characterization of Parts/RBS Ribosome Binding Sites| RBS Ribosome Binding Sites]]
  
−
[[Image:Part_icon_terminator.png|Transcriptional Terminator]] [[Characterization of Parts/Transcriptional Terminators|Transcriptional Terminators]]
+
[[Image:Part_icon_terminator.png|Transcriptional Terminator]] [[Help:Terminators/Measurement|Transcriptional Terminators]]
 +
 
 +
|width="6%"|
 +
|width="47%"|
 +
|}
 +
</DIV>
 +
</div>
 +
 
 +
|width="4%"|
 +
 
 +
|width="30%"|
 +
<DIV style='clear:right;float:left; width:100%'>
 +
'''Chassis'''
 +
 
 +
*E.coli
 +
*Yeast
 +
*Mammalian
 +
<DIV style='height:7px; width: 100%; background: orange; border: 1px solid black;'></DIV>
 +
 
 +
'''Vectors'''
  
 
[[Image:Part_icon_plasmid.png]] [[Characterization of Parts/Plasmids|Plasmids]]
 
[[Image:Part_icon_plasmid.png]] [[Characterization of Parts/Plasmids|Plasmids]]
 +
 +
<DIV style='height:7px; width: 100%; background: orange; border: 1px solid black;'></DIV>
 +
 +
'''Other'''
 +
 +
[[Image:Part_icon_tag.png|Tag]] [[Characterization of Parts/Tags|Tags]]
 +
 +
</DIV>
 +
|}
  
 
==Relevant Discussions==
 
==Relevant Discussions==
 
*[http://openwetware.org/wiki/Parts_characterization/Measurement_techniques Measurement techniques]
 
*[http://openwetware.org/wiki/Parts_characterization/Measurement_techniques Measurement techniques]
 
*[http://openwetware.org/wiki/Parts_characterization/Characterization_approaches Characterization approaches]
 
*[http://openwetware.org/wiki/Parts_characterization/Characterization_approaches Characterization approaches]

Latest revision as of 19:28, 28 June 2017

This page discusses methods to classify and characterize parts in the Registry.

Visit Part Types to view the actual parts in the Registry


General Characterization Techniques

Currently, the most commonly used method of testing parts is through fluorescence assays.
Protocols for such assays can be found in the following places:

  • Endy Lab's Openwetware [protocols] for characterizing parts
  • Penn State is also working on characterizing parts using fluorescence

Characterization Techniques for specific part types

Chassis

  • E.coli
  • Yeast
  • Mammalian

Vectors

Part icon plasmid.png Plasmids

Other

Tag Tags

Relevant Discussions

  • [http://openwetware.org/wiki/Parts_characterization/Measurement_techniques Measurement techniques]
  • [http://openwetware.org/wiki/Parts_characterization/Characterization_approaches Characterization approaches]