Difference between revisions of "Part:BBa K2020001:Design"

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===Design Notes===
 
===Design Notes===
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The sequence of the subtilisin E gene from Bacillus subtilis was codon optimized for E. coli with the DNA and protein sequence analysis software "Geneious" and additionally with the "Codon Optimization Tool" from IDT. Moreover, the leader sequence pelB begins with a start codon and was placed in front of the subtilisin E gene to generate a functional coding sequence that can be expressed in E. coli.
 
The sequence of the subtilisin E gene from Bacillus subtilis was codon optimized for E. coli with the DNA and protein sequence analysis software "Geneious" and additionally with the "Codon Optimization Tool" from IDT. Moreover, the leader sequence pelB begins with a start codon and was placed in front of the subtilisin E gene to generate a functional coding sequence that can be expressed in E. coli.
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===Source===
 
===Source===
  
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The sequence of the signal peptide pelB was obtained through the Registry ([https://parts.igem.org/Part:BBa_J32015 BBa_J32015]). Together with the subtilisin E gene ([https://parts.igem.org/Part:BBa_K2020000 BBa_K2020000]) it was ordered from IDT.
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The sequence of the signal peptide pelB was obtained through the Registry ([[Part:BBa_J32015|BBa_J32015]]). Together with the subtilisin E gene ([[Part:BBa_K2020000|BBa_K2020000]]) it was ordered from IDT.
  
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===References===
 
===References===
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Latest revision as of 20:12, 8 October 2016


subtilisin E gene with leader sequence pelB


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 54
  • 1000
    COMPATIBLE WITH RFC[1000]


Design Notes

The sequence of the subtilisin E gene from Bacillus subtilis was codon optimized for E. coli with the DNA and protein sequence analysis software "Geneious" and additionally with the "Codon Optimization Tool" from IDT. Moreover, the leader sequence pelB begins with a start codon and was placed in front of the subtilisin E gene to generate a functional coding sequence that can be expressed in E. coli.


Source

The sequence of the signal peptide pelB was obtained through the Registry (BBa_J32015). Together with the subtilisin E gene (BBa_K2020000) it was ordered from IDT.