Difference between revisions of "Part:BBa K2042002:Design"

Revision as of 16:57, 4 September 2016

Pseudomonas sp. MBEL 6-19 PHA synthase 1

Assembly Compatibility:

10
COMPATIBLE WITH RFC[10]
12
COMPATIBLE WITH RFC[12]
21
COMPATIBLE WITH RFC[21]
23
COMPATIBLE WITH RFC[23]
25
INCOMPATIBLE WITH RFC[25]
Illegal NgoMIV site found at 1060
Illegal NgoMIV site found at 1339
Illegal AgeI site found at 135
Illegal AgeI site found at 448
1000
COMPATIBLE WITH RFC[1000]

Design Notes

Silent mutation was introduce for removing restriction site. The iGEM Team Evry 2016 used this enzyme as the second enzyme in the pathway to produce Polylactic acid (PLA) in Pseudomonas putida.

Source

This sequence was synthetized by IDT

References

Biosynthesis of Polylactic Acid and Its Copolymers using Evolved Propionate CoA Transferase and PHA Synthase
Taek Ho Yang,1 Tae Wan Kim,1 Hye Ok Kang,1 Sang-Hyun Lee,1 Eun Jeong Lee,1 Sung-Chul Lim,1 Sun Ok Oh,1 Ae-Jin Song,2 Si Jae Park,1 Sang Yup Lee2,3
http://www.ncbi.nlm.nih.gov/pubmed/19937726

Tailor-made type II Pseudomonas PHA synthases and their use for the biosynthesis of polylactic acid and its copolymer in recombinant Escherichia coli.
Yang TH1, Jung YK, Kang HO, Kim TW, Park SJ, Lee SY.
http://www.ncbi.nlm.nih.gov/pubmed/21221571

Microbial production of lactate-containing polyesters.
Yang JE1, Choi SY, Shin JH, Park SJ, Lee SY.
http://www.ncbi.nlm.nih.gov/pubmed/23718266

@@ Line 7: / Line 7: @@
 ===Design Notes===
-This sequence was codon optimized for Pseudomonas putida and silent mutation was introduce for removing restriction site.
+Silent mutation was introduce for removing restriction site.
 The iGEM Team Evry 2016 used this enzyme as the second enzyme in the pathway to produce Polylactic acid (PLA) in Pseudomonas putida.