Difference between revisions of "Part:BBa K1694033"
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<partinfo>BBa_K1694033 short</partinfo> | <partinfo>BBa_K1694033 short</partinfo> | ||
<h1>'''Introduction:'''</h1> | <h1>'''Introduction:'''</h1> | ||
+ | [[File:VEGFGFP.png|900px|thumb|center|'''Fig.1'''Pcons+RBS+Lpp-OmpA-N+Anti-VEGF+RBS+GFP+Ter]] | ||
+ | <br> | ||
+ | |||
+ | <p style="font-size:120%">'''Transformation of single plasmid'''</p> | ||
To prove that our scFv can actually bind on to the antigen on cancer cells, we connected each scFv with a different fluorescence protein. Therefore we could use fluorescence microscope to clearly observe if the E. coli has produced scFv proteins. Currently,we built three different scFv connected with their respectively fluorescence protein, which are Anti-VEGF+GFP, Anti-EGFR+RFP, Anti-HER2+BFP. When applied on cell staining, we can identify the antigen distribution on cancer cells by observing the fluorescence. Furthermore, if we use the three scFv simultaneously, we can also detect multiple markers. | To prove that our scFv can actually bind on to the antigen on cancer cells, we connected each scFv with a different fluorescence protein. Therefore we could use fluorescence microscope to clearly observe if the E. coli has produced scFv proteins. Currently,we built three different scFv connected with their respectively fluorescence protein, which are Anti-VEGF+GFP, Anti-EGFR+RFP, Anti-HER2+BFP. When applied on cell staining, we can identify the antigen distribution on cancer cells by observing the fluorescence. Furthermore, if we use the three scFv simultaneously, we can also detect multiple markers. | ||
+ | |||
+ | <h1>'''Experiment'''</h1> | ||
+ | [[File:PROBGFP-1.png|900px|thumb|center|'''Fig.3'''The PCR result of the Pcons+B0034+Lpp-OmpA-N+scFv(Anti-VEGF)+B0030+GFP+J61048. The DNA sequence length is around 2000~2200 bp, so the PCR products should appear at 2200~2400 bp.]] | ||
+ | After assemble the DNA sequences from the basic parts, we recombined each Pcons+B0034+Lpp-OmpA-N+scFv(Anti-VEGF)+B0030+GFP+J61048 gene to PSB1C3 backbones and conducted a PCR experiment to check the size of each of the parts. The DNA sequence length of the these parts are around 2000~2200 bp. In this PCR experiment, the PCR products size should be near at 2200~2400 bp. The Fig.3 showed the correct size of this part, and proved that we successful ligated the sequence onto an ideal backbone. | ||
+ | |||
+ | |||
+ | [[File:PROBGFP.png|200px|thumb|center|'''Fig.4'''Pcons+B0034+Lpp-OmpA-N+scFv(anti-VEGF)+B0030+GFP+J61048]] | ||
<!-- Add more about the biology of this part here | <!-- Add more about the biology of this part here |
Revision as of 01:20, 20 September 2015
Pcons+B0034+Lpp-OmpA-N+scFv(Anti-VEGF)+B0030+GFP+J61048
Introduction:
Transformation of single plasmid
To prove that our scFv can actually bind on to the antigen on cancer cells, we connected each scFv with a different fluorescence protein. Therefore we could use fluorescence microscope to clearly observe if the E. coli has produced scFv proteins. Currently,we built three different scFv connected with their respectively fluorescence protein, which are Anti-VEGF+GFP, Anti-EGFR+RFP, Anti-HER2+BFP. When applied on cell staining, we can identify the antigen distribution on cancer cells by observing the fluorescence. Furthermore, if we use the three scFv simultaneously, we can also detect multiple markers.
Experiment
After assemble the DNA sequences from the basic parts, we recombined each Pcons+B0034+Lpp-OmpA-N+scFv(Anti-VEGF)+B0030+GFP+J61048 gene to PSB1C3 backbones and conducted a PCR experiment to check the size of each of the parts. The DNA sequence length of the these parts are around 2000~2200 bp. In this PCR experiment, the PCR products size should be near at 2200~2400 bp. The Fig.3 showed the correct size of this part, and proved that we successful ligated the sequence onto an ideal backbone.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 7
Illegal NheI site found at 30 - 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal NgoMIV site found at 451
Illegal NgoMIV site found at 2013 - 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 1929