Difference between revisions of "Part:BBa K1813009"
 
(5 intermediate revisions by the same user not shown)
Line 11: Line 11:
 
<partinfo>BBa_K1813009 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K1813009 SequenceAndFeatures</partinfo>
  
 +
<partinfo>BBa_K1813009 parameters</partinfo>
  
−
 
−
<partinfo>BBa_K1813009 parameters</partinfo>
 
−
<!-- -->
 
 
<html>
 
<html>
−
<h2>Background of <i>nicF</i>:</h2>
+
<h2>Background of <i>nicF</i></h2>
−
<h4>Part Description:</h4>
+
<h4>Part Description</h4>
−
<p>Codon optimized coding sequence of <i>nicF</i>, an enzyme from the <i>Pseudmonas putida</i> bacterium KT2240, for E.Coli. This composite part was used to make our part <a href="https://parts.igem.org/wiki/index.php?title=Part:BBa_K1813023">BBa_K1813023</a>. </p>
+
<p>Codon optimized coding sequence of <i>nicF</i>, an enzyme from the <i>Pseudmonas putida</i> bacterium KT2240, for E.Coli. This composite part was used to make our part <html><a href="https://parts.igem.org/wiki/index.php?title=Part:BBa_K1813017">BBa_K1813017</a> </html> and
 +
<html><a href="https://parts.igem.org/wiki/index.php?title=Part:BBa_K1813023">BBa_K1813023</a> </html>.
  
−
<h4>Part Origin:</h4>
+
<h4>Part Origin</h4>
 
<p>Originally cloned and characterized by Jimenez et al. from <i>Pseudmonas putida</i> KT2240 [1].</p>
 
<p>Originally cloned and characterized by Jimenez et al. from <i>Pseudmonas putida</i> KT2240 [1].</p>
  
−
<h4>Part Function:</h4>
+
<h4>Part Function</h4>
 
<p>The enzyme coded for by <i>nicF</i> converts Maleamic Acid to Maleic Acid.</p>
 
<p>The enzyme coded for by <i>nicF</i> converts Maleamic Acid to Maleic Acid.</p>
  
−
<h4>References:</h4>
+
<h4>References</h4>
 
[1] Jose I. Jimenez, Angeles Canales, Jesus Jimenez-Barbero, et al. (2008)Deciphering the genetic determinants for aerobic nicotinic acid degradation: The nic cluster from Pseudomonas putida KT2440. PNAS 105(32): doi10.1073/pnas.0802273105
 
[1] Jose I. Jimenez, Angeles Canales, Jesus Jimenez-Barbero, et al. (2008)Deciphering the genetic determinants for aerobic nicotinic acid degradation: The nic cluster from Pseudomonas putida KT2440. PNAS 105(32): doi10.1073/pnas.0802273105

Latest revision as of 00:28, 19 September 2015

nicF

nicF Gen Bank accession number Q88FY5.1.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 439
  • 1000
    COMPATIBLE WITH RFC[1000]

Background of nicF

Part Description

Codon optimized coding sequence of nicF, an enzyme from the Pseudmonas putida bacterium KT2240, for E.Coli. This composite part was used to make our part BBa_K1813017 and BBa_K1813023 .

Part Origin

Originally cloned and characterized by Jimenez et al. from Pseudmonas putida KT2240 [1].

Part Function

The enzyme coded for by nicF converts Maleamic Acid to Maleic Acid.

References

[1] Jose I. Jimenez, Angeles Canales, Jesus Jimenez-Barbero, et al. (2008)Deciphering the genetic determinants for aerobic nicotinic acid degradation: The nic cluster from Pseudomonas putida KT2440. PNAS 105(32): doi10.1073/pnas.0802273105