Difference between revisions of "Part:BBa K1813009"
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<span class='h3bb'>Sequence and Features</span> | <span class='h3bb'>Sequence and Features</span> | ||
<partinfo>BBa_K1813009 SequenceAndFeatures</partinfo> | <partinfo>BBa_K1813009 SequenceAndFeatures</partinfo> | ||
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<partinfo>BBa_K1813009 parameters</partinfo> | <partinfo>BBa_K1813009 parameters</partinfo> | ||
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<h2>Background of <i>nicF</i>:</h2> | <h2>Background of <i>nicF</i>:</h2> | ||
<h4>Part Description:</h4> | <h4>Part Description:</h4> | ||
− | <p>Codon optimized coding sequence of <i>nicF</i>, an enzyme from the <i>Pseudmonas putida</i> bacterium KT2240, for E.Coli. This composite part was used to make our part <a href="https://parts.igem.org/wiki/index.php?title=Part:BBa_K1813023">BBa_K1813023</a> | + | <p>Codon optimized coding sequence of <i>nicF</i>, an enzyme from the <i>Pseudmonas putida</i> bacterium KT2240, for E.Coli. This composite part was used to make our part <html><a href="https://parts.igem.org/wiki/index.php?title=Part:BBa_K1813017">BBa_K1813017</a> </html> and |
+ | <html><a href="https://parts.igem.org/wiki/index.php?title=Part:BBa_K1813023">BBa_K1813023</a> </html>. | ||
<h4>Part Origin:</h4> | <h4>Part Origin:</h4> |
Revision as of 22:06, 18 September 2015
nicF
nicF Gen Bank accession number Q88FY5.1.
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal NgoMIV site found at 439
- 1000COMPATIBLE WITH RFC[1000]
Background of nicF:
Part Description:
Codon optimized coding sequence of nicF, an enzyme from the Pseudmonas putida bacterium KT2240, for E.Coli. This composite part was used to make our part BBa_K1813017 and BBa_K1813023 .
Part Origin:
Originally cloned and characterized by Jimenez et al. from Pseudmonas putida KT2240 [1].
Part Function:
The enzyme coded for by nicF converts Maleamic Acid to Maleic Acid.
References:
[1] Jose I. Jimenez, Angeles Canales, Jesus Jimenez-Barbero, et al. (2008)Deciphering the genetic determinants for aerobic nicotinic acid degradation: The nic cluster from Pseudomonas putida KT2440. PNAS 105(32): doi10.1073/pnas.0802273105