Difference between revisions of "Part:BBa K1633008:Experience"
(→Stimulation of exosome and exosomal siRNA secretion by introduction of nSMase 2) |
(→Applications of BBa_K1633008) |
||
| Line 21: | Line 21: | ||
Figure 16. (A) Total amounts of exosomes (shown as total protein) secreted by HEK293 cells with or without the introduction of nSMase2. (B) Quantitative RT-PCR analysis of siRNA levels in exosomes secreted by HEK293 cells with or without the introduction of nSMase2. | Figure 16. (A) Total amounts of exosomes (shown as total protein) secreted by HEK293 cells with or without the introduction of nSMase2. (B) Quantitative RT-PCR analysis of siRNA levels in exosomes secreted by HEK293 cells with or without the introduction of nSMase2. | ||
| + | |||
| + | We then performed nanoparticle tracking analysis (NTA) to have a more precise determination of the quantity and size of secreted exosomes. The use of Nanosight enabled quantification and size determination of the EV, as nanoparticles can be automatically tracked and sized based on Brownian motion and the diffusion coefficient. Because exosomes are more homogenous and generally smaller than most EVs with a diameter size ranging from 40 to 120 nm, the percentage of nanoparticles whose size ranges from 40 to 120 nm could be a good indicator of total amount of exosomes. The shift of peak of size distribution of EV from 170 nm to 120 nm and the significant raise of the peak indicated the increase of relative level of exosomes in secreted EVs after overexpression nSMase2 in HEK293 cells. From what we have discussed above, the improvement of manufacturing exosomes by overexpressing nSMase2 is proved to be feasible and effective. | ||
| + | |||
| + | [[File:NJU-China-parts-nsmase2.jpg]] | ||
| + | |||
| + | |||
| + | Figure 10. Characterization of secreted exosomes after overexpression of nSMase2 in HEK293 cells. (A and B) Representative screen shots of the NTA videos for EV from HEK293 cells under normal condition or after transfection with nSMase2 plasmid. (C and D) Size and intensity of EV from HEK293 cells under normal condition or after transfection with nSMase2 plasmid. (E) Concentration of different particle sizes of exosomes with (red line) or without (blue line) transfection with nSMase2 plasmid. The peak of size distribution of EV shifted from 170 nm to 120 nm after transfection with nsMase2 plasmid, indicating the increase in quantity of secreted exosomes. | ||
===User Reviews=== | ===User Reviews=== | ||
Revision as of 12:22, 18 September 2015
This experience page is provided so that any user may enter their experience using this part.
Please enter
how you used this part and how it worked out.
Applications of BBa_K1633008
USAGE AND BIOLOGY
Neutral sphingomyelinase 2 (nSMase 2) is a key regulatory enzyme generating ceramide from sphingomyelin and can actively induce exosome secretion from cells and trigger cellular export of small RNAs. The original sequence of nSMase 2 from Homo Sapiens is from NCBI. NCBI Gene ID is 55512. The sequence codon of this part was optimized. We ordered the sequence from a DNA synthesis company. When this part is inserted into pcDNA 3.1 vector and transfected into mammalian cells, it can express nSMase 2 gene in mammalian cells and stimulate the secretion of exosomal siRNAs from cells.
CHARACTERIZATION
Stimulation of exosome and exosomal siRNA secretion by introduction of nSMase 2
Extracellular vesicles (EVs) are generated through biogenetic mechanisms involving neutral sphingomyelinase (nsMase).
Because nSMase2 can stimulate both exosome production and siRNA loading to exosomes, we selected nSMase2 as a “molecular pump” to accelerate the amounts of exosomes released by cells and to promote the generation of exosomal siRNAs. A plasmid expressing nSMase2 was constructed and transfected into HEK293 cells to stimulate the secretion of exosomes and exosomal siRNA from HEK293 cells. As anticipated, both exosomes and exosomal siRNA secreted by HEK293 cells were increased after overexpressing nSMase2 in HEK293 cells.
Figure 16. (A) Total amounts of exosomes (shown as total protein) secreted by HEK293 cells with or without the introduction of nSMase2. (B) Quantitative RT-PCR analysis of siRNA levels in exosomes secreted by HEK293 cells with or without the introduction of nSMase2.
We then performed nanoparticle tracking analysis (NTA) to have a more precise determination of the quantity and size of secreted exosomes. The use of Nanosight enabled quantification and size determination of the EV, as nanoparticles can be automatically tracked and sized based on Brownian motion and the diffusion coefficient. Because exosomes are more homogenous and generally smaller than most EVs with a diameter size ranging from 40 to 120 nm, the percentage of nanoparticles whose size ranges from 40 to 120 nm could be a good indicator of total amount of exosomes. The shift of peak of size distribution of EV from 170 nm to 120 nm and the significant raise of the peak indicated the increase of relative level of exosomes in secreted EVs after overexpression nSMase2 in HEK293 cells. From what we have discussed above, the improvement of manufacturing exosomes by overexpressing nSMase2 is proved to be feasible and effective.
Figure 10. Characterization of secreted exosomes after overexpression of nSMase2 in HEK293 cells. (A and B) Representative screen shots of the NTA videos for EV from HEK293 cells under normal condition or after transfection with nSMase2 plasmid. (C and D) Size and intensity of EV from HEK293 cells under normal condition or after transfection with nSMase2 plasmid. (E) Concentration of different particle sizes of exosomes with (red line) or without (blue line) transfection with nSMase2 plasmid. The peak of size distribution of EV shifted from 170 nm to 120 nm after transfection with nsMase2 plasmid, indicating the increase in quantity of secreted exosomes.
User Reviews
UNIQ6bd0e8c231322b17-partinfo-00000000-QINU UNIQ6bd0e8c231322b17-partinfo-00000001-QINU