Difference between revisions of "Part:BBa K1587004"
Line 4: | Line 4: | ||
Constitutive promoter p(Bla). Crotonyl-coA reductase ccr coding region. 3-hydroxybutyryl-CoA dehydrogenase hbd coding region. 3-hydroxybutyryl-CoA dehydratase crt coding region. Acyl-CoA thioesterase 2 tesB coding region. acetyl-CoA acetyltransferase atoB coding region. Every genes are framed by strong RBS based on Ron Weiss thesis. This operon ends with an artificial terminator according to BBa_B1006. | Constitutive promoter p(Bla). Crotonyl-coA reductase ccr coding region. 3-hydroxybutyryl-CoA dehydrogenase hbd coding region. 3-hydroxybutyryl-CoA dehydratase crt coding region. Acyl-CoA thioesterase 2 tesB coding region. acetyl-CoA acetyltransferase atoB coding region. Every genes are framed by strong RBS based on Ron Weiss thesis. This operon ends with an artificial terminator according to BBa_B1006. | ||
Due to a lack of time we decided to have this construction synthesised instead of using the assembly protocol. Unfortunatly NMR analysis did not yield a significant over production of butyrate in E. coli. | Due to a lack of time we decided to have this construction synthesised instead of using the assembly protocol. Unfortunatly NMR analysis did not yield a significant over production of butyrate in E. coli. | ||
− | <center>[[File: | + | <center>[[File:TLSE SHLAGAGA.png]]</center> |
'''Figure 1: Genetic construct to produce butyrate via glucose''' | '''Figure 1: Genetic construct to produce butyrate via glucose''' | ||
Revision as of 18:26, 17 September 2015
Butyrate synthesis pathway regulated by constitutive promoter p(Bla)
Constitutive promoter p(Bla). Crotonyl-coA reductase ccr coding region. 3-hydroxybutyryl-CoA dehydrogenase hbd coding region. 3-hydroxybutyryl-CoA dehydratase crt coding region. Acyl-CoA thioesterase 2 tesB coding region. acetyl-CoA acetyltransferase atoB coding region. Every genes are framed by strong RBS based on Ron Weiss thesis. This operon ends with an artificial terminator according to BBa_B1006. Due to a lack of time we decided to have this construction synthesised instead of using the assembly protocol. Unfortunatly NMR analysis did not yield a significant over production of butyrate in E. coli.
Figure 1: Genetic construct to produce butyrate via glucose
Figure 2: Metabolic pathway to produce butyrate via glucose using BBa_K1587004 in E. coli
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 36
- 21INCOMPATIBLE WITH RFC[21]Illegal BglII site found at 1717
Illegal BamHI site found at 3634
Illegal XhoI site found at 1407 - 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal AgeI site found at 332
Illegal AgeI site found at 1254
Illegal AgeI site found at 2900 - 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 1752
Illegal BsaI.rc site found at 2169
Illegal BsaI.rc site found at 3237
Illegal SapI site found at 123
Illegal SapI.rc site found at 3249