Difference between revisions of "Part:BBa K1871001"

 
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
 
 
__NOTOC__
 
__NOTOC__
 
<partinfo>BBa_K1871001 short</partinfo>
 
<partinfo>BBa_K1871001 short</partinfo>
  
−
This is an alpha amylase promoter derived from Bacillus amyloliquefaciens. It is flanked by Kozak sequence (Part BBa_K165002) the ADH1 terminator (Part BBa_K392003)
+
[[File:alphaamylase.jpg|200 px|right|Alpha amylase protein]]
−
. Expression is controlled by the cyc yeast promoter (Part BBa_K105027).
+
 
 +
This is an alpha amylase promoter derived from ''Bacillus amyloliquefaciens''. It is flanked by Kozak sequence the ADH1 terminator. Expression is controlled by the minimal cyc yeast promoter.
 +
 
 +
====Minimal cyc promoter====
 +
This part is the center of the CYC1 promoter, ''S. cerevisiae''. This promoter allows basal transcription, and the transcription signal can be modulated by adding operator sites upstream of this BioBrick. This allows activators or repressors to act on the transcription machinery.
 +
 
 +
====Kozak Sequence====
 +
This part initiates translation from eukaryotic mRNA and is cloned between a promoter and coding region to facilitate translation.
 +
 
 +
Native Alpha Amylase Secretion Sequence
 +
This is the native ''Bacillus amyloliquefaciens'' signal sequence, which directs the protein to be secreted.
 +
 
 +
====Alpha Amylase====
 +
Obtained from ''Bacillus amyloliquefaciens'', alpha amylase is a protein enzyme that hydrolyses alpha bonds of large, alpha-linked polysaccharides, such as starch and glycogen.
 +
 
 +
====ADH1 Terminator====
 +
This part is the terminator region from yeast alcohol dehydrogenase (ADH1) gene. This stops the RNA polymerase from transcribing the RNA sequence.
  
  

Latest revision as of 00:59, 17 September 2015

Alpha amylase with native secretion

Alpha amylase protein

This is an alpha amylase promoter derived from Bacillus amyloliquefaciens. It is flanked by Kozak sequence the ADH1 terminator. Expression is controlled by the minimal cyc yeast promoter.

Minimal cyc promoter

This part is the center of the CYC1 promoter, S. cerevisiae. This promoter allows basal transcription, and the transcription signal can be modulated by adding operator sites upstream of this BioBrick. This allows activators or repressors to act on the transcription machinery.

Kozak Sequence

This part initiates translation from eukaryotic mRNA and is cloned between a promoter and coding region to facilitate translation.

Native Alpha Amylase Secretion Sequence This is the native Bacillus amyloliquefaciens signal sequence, which directs the protein to be secreted.

Alpha Amylase

Obtained from Bacillus amyloliquefaciens, alpha amylase is a protein enzyme that hydrolyses alpha bonds of large, alpha-linked polysaccharides, such as starch and glycogen.

ADH1 Terminator

This part is the terminator region from yeast alcohol dehydrogenase (ADH1) gene. This stops the RNA polymerase from transcribing the RNA sequence.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 105
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 1533
    Illegal NgoMIV site found at 1548
    Illegal AgeI site found at 1851
  • 1000
    COMPATIBLE WITH RFC[1000]