Difference between revisions of "Part:BBa K1412614:Experience"

(Characterization stage)
(Characterization stage)
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===='''Characterization stage'''====
 
===='''Characterization stage'''====
 
1.Transfer the part pBAD-RBS-<i>CheZ</i>-TT BBa_K1412624 into <i>E.coli</i> (<i>CheZ</i> knocked out), and coat plates, culture for hours to measure the migration diameter of <i>E.coli</i>.
 
 
  
 
1. Transfer pBAD-RBS-<i>CheZ</i>-TT<bbpart>BBa_K1412624</bbpart> into competent cell of E.coli (ΔCheZ) respectively.  
 
1. Transfer pBAD-RBS-<i>CheZ</i>-TT<bbpart>BBa_K1412624</bbpart> into competent cell of E.coli (ΔCheZ) respectively.  
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And culture the bacteria in constant temperature and humidity incubator at 37℃.  
 
And culture the bacteria in constant temperature and humidity incubator at 37℃.  
 
+
[[File:Protocol_of_M63.jpg |800px]]
  
 
6. The initial colony radius is recorded as R1, and the radius are measured at 12h, 24h, 30h, 36h, 42h... as R2, R3, R4, R5, R6, R7…
 
6. The initial colony radius is recorded as R1, and the radius are measured at 12h, 24h, 30h, 36h, 42h... as R2, R3, R4, R5, R6, R7…

Revision as of 05:58, 11 October 2014

This experience page is provided so that any user may enter their experience using this part.
Please enter how you used this part and how it worked out.

Protocol


Genetic link stage

1.As a skeleton, TT terminator link with target gene CheZ.

2.Then link the skeleton to target gene CheZ-TT.

3.Next, link RBS-CheZ-TT with promoter Plac.

Verification

Verification.png

Characterization stage

1. Transfer pBAD-RBS-CheZ-TTBBa_K1412624 into competent cell of E.coli (ΔCheZ) respectively.

2. Coated plates(LB solid medium with the antibiotic concentration 50ug/ml chloromycetin) and culture in 37℃ biochemical incubator

for 12h.

3. Select colony to culture in 5ml LB fluid medium, of which the antibiotic concentration is 50ug/ml chloromycetin.

4. Activation of bacterium: transfer 50uL bacterium medium into a new 5ml LB fluid medium, of which the antibiotic concentration is

50ug/ml chloromycetin.

5. Stab of bacterium: We draw three dots on a plate before, then stab 3ul bacterium medium into the M63 semisolid medium at the dots.

And culture the bacteria in constant temperature and humidity incubator at 37℃. Protocol of M63.jpg

6. The initial colony radius is recorded as R1, and the radius are measured at 12h, 24h, 30h, 36h, 42h... as R2, R3, R4, R5, R6, R7…

The chemotaxis rate grows higher over time, larger radius bringing less error. Each radius minus R1 is the net chemotaxis radius at

certain time. Plot the net chemotaxis radius versus time and set the radius of pLac-RBS (1.0)-CheZ-TT as RBS strength 1.0. Then we

can calculate the RBS efficiency (ΔR2L/ΔR2M) and (R2J/ΔR2M) and compare them with the official data.

Applications of BBa_K1412614

User Reviews

UNIQd95566c7a6a9c004-partinfo-00000001-QINU UNIQd95566c7a6a9c004-partinfo-00000002-QINU