| − | <html><!--- Please copy this table containing parameters for BBa_ at the end of the parametrs section ahead of the references. ---><style type="text/css">table#AutoAnnotator {border:1px solid black; width:100%; border-collapse:collapse;} th#AutoAnnotatorHeader { border:1px solid black; width:100%; background-color: rgb(221, 221, 221);} td.AutoAnnotator1col { width:100%; border:1px solid black; } span.AutoAnnotatorSequence { font-family:'Courier New', Arial; } td.AutoAnnotatorSeqNum { text-align:right; width:2%; } td.AutoAnnotatorSeqSeq { width:98% } td.AutoAnnotatorSeqFeat1 { width:3% } td.AutoAnnotatorSeqFeat2a { width:27% } td.AutoAnnotatorSeqFeat2b { width:97% } td.AutoAnnotatorSeqFeat3 { width:70% } table.AutoAnnotatorNoBorder { border:0px; width:100%; border-collapse:collapse; } table.AutoAnnotatorWithBorder { border:1px solid black; width:100%; border-collapse:collapse; } td.AutoAnnotatorOuterAmino { border:0px solid black; width:20% } td.AutoAnnotatorInnerAmino { border:1px solid black; width:50% } td.AutoAnnotatorAminoCountingOuter { border:1px solid black; width:40%; } td.AutoAnnotatorBiochemParOuter { border:1px solid black; width:60%; } td.AutoAnnotatorAminoCountingInner1 { width: 7.5% } td.AutoAnnotatorAminoCountingInner2 { width:62.5% } td.AutoAnnotatorAminoCountingInner3 { width:30% } td.AutoAnnotatorBiochemParInner1 { width: 5% } td.AutoAnnotatorBiochemParInner2 { width:55% } td.AutoAnnotatorBiochemParInner3 { width:40% } td.AutoAnnotatorCodonUsage1 { width: 3% } td.AutoAnnotatorCodonUsage2 { width:14.2% } td.AutoAnnotatorCodonUsage3 { width:13.8% } td.AutoAnnotatorAlignment1 { width: 3% } td.AutoAnnotatorAlignment2 { width: 10% } td.AutoAnnotatorAlignment3 { width: 87% } td.AutoAnnotatorLocalizationOuter {border:1px solid black; width:40%} td.AutoAnnotatorGOOuter {border:1px solid black; width:60%} td.AutoAnnotatorLocalization1 { width: 7.5% } td.AutoAnnotatorLocalization2 { width: 22.5% } td.AutoAnnotatorLocalization3 { width: 70% } td.AutoAnnotatorGO1 { width: 5% } td.AutoAnnotatorGO2 { width: 35% } td.AutoAnnotatorGO3 { width: 60% } td.AutoAnnotatorPredFeat1 { width:3% } td.AutoAnnotatorPredFeat2a { width:27% } td.AutoAnnotatorPredFeat3 { width:70% } div.AutoAnnotator_trans { position:absolute; background:rgb(11,140,143); background-color:rgba(11,140,143, 0.8); height:5px; top:100px; } div.AutoAnnotator_sec_helix { position:absolute; background:rgb(102,0,102); background-color:rgba(102,0,102, 0.8); height:5px; top:110px; } div.AutoAnnotator_sec_strand { position:absolute; background:rgb(245,170,26); background-color:rgba(245,170,26, 1); height:5px; top:110px; } div.AutoAnnotator_acc_buried { position:absolute; background:rgb(89,168,15); background-color:rgba(89,168,15, 0.8); height:5px; top:120px; } div.AutoAnnotator_acc_exposed { position:absolute; background:rgb(0, 0, 255); background-color:rgba(0, 0, 255, 0.8); height:5px; top:120px; } div.AutoAnnotator_dis { position:absolute; text-align:center; font-family:Arial,Helvetica,sans-serif; background:rgb(255, 200, 0); background-color:rgba(255, 200, 0, 1); height:16px; width:16px; top:80px; border-radius:50%; } </style><div id='AutoAnnotator_container_1382695602201'><table id="AutoAnnotator"><tr><!-- Time stamp in ms since 1/1/1970 1382695602201 --><th id="AutoAnnotatorHeader" colspan="2">Protein data table for BioBrick <a href="https://parts.igem.org/wiki/index.php?title=Part:BBa_K1088018</a> automatically created by the <a href="http://2013.igem.org/Team:TU-Munich/Results/AutoAnnotator">BioBrick-AutoAnnotator</a> version 1.0</th></tr><tr><td class="AutoAnnotator1col" colspan="2"><strong>Nucleotide sequence</strong> in <strong>RFC 10</strong>: (underlined part encodes the protein)<br><span class="AutoAnnotatorSequence"> <u>ATGAAACCA ... AGCGGGCAG</u>TGA</span><br> <strong>ORF</strong> from nucleotide position 1 to 1080 (excluding stop-codon)</td></tr><tr><td class="AutoAnnotator1col" colspan="2"><strong>Amino acid sequence:</strong> (RFC 25 scars in shown in bold, other sequence features underlined; both given below)<br><span class="AutoAnnotatorSequence"><table class="AutoAnnotatorNoBorder"><tr><td class="AutoAnnotatorSeqNum">1 <br>101 <br>201 <br>301 </td><td class="AutoAnnotatorSeqSeq">MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVE<br>RSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAG<br>WHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTS<br>VDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPRALADSLMQLARQVSRLESGQ*</td></tr></table></span></td></tr><tr><td class="AutoAnnotator1col" colspan="2"><strong>Sequence features:</strong> (with their position in the amino acid sequence, see the <a href="http://2013.igem.org/Team:TU-Munich/Results/Software/FeatureList">list of supported features</a>)<table class="AutoAnnotatorNoBorder"><tr><td class="AutoAnnotatorSeqFeat1"></td><td class="AutoAnnotatorSeqFeat2b">None of the supported features appeared in the sequence</td></tr></table></td></tr><tr><td class="AutoAnnotator1col" colspan="2"><strong>Amino acid composition:</strong><table class="AutoAnnotatorNoBorder"><tr><td class="AutoAnnotatorOuterAmino"><table class="AutoAnnotatorWithBorder"><tr><td class="AutoAnnotatorInnerAmino">Ala (A)</td><td class="AutoAnnotatorInnerAmino">44 (12.2%)</td></tr><tr><td class="AutoAnnotatorInnerAmino">Arg (R)</td><td class="AutoAnnotatorInnerAmino">19 (5.3%)</td></tr><tr><td class="AutoAnnotatorInnerAmino">Asn (N)</td><td class="AutoAnnotatorInnerAmino">12 (3.3%)</td></tr><tr><td class="AutoAnnotatorInnerAmino">Asp (D)</td><td class="AutoAnnotatorInnerAmino">17 (4.7%)</td></tr></table></td><td class="AutoAnnotatorOuterAmino"><table class="AutoAnnotatorWithBorder"><tr><td class="AutoAnnotatorInnerAmino">Cys (C)</td><td class="AutoAnnotatorInnerAmino">3 (0.8%)</td></tr><tr><td class="AutoAnnotatorInnerAmino">Gln (Q)</td><td class="AutoAnnotatorInnerAmino">28 (7.8%)</td></tr><tr><td class="AutoAnnotatorInnerAmino">Glu (E)</td><td class="AutoAnnotatorInnerAmino">15 (4.2%)</td></tr><tr><td class="AutoAnnotatorInnerAmino">Gly (G)</td><td class="AutoAnnotatorInnerAmino">22 (6.1%)</td></tr></table></td><td class="AutoAnnotatorOuterAmino"><table class="AutoAnnotatorWithBorder"><tr><td class="AutoAnnotatorInnerAmino">His (H)</td><td class="AutoAnnotatorInnerAmino">7 (1.9%)</td></tr><tr><td class="AutoAnnotatorInnerAmino">Ile (I)</td><td class="AutoAnnotatorInnerAmino">18 (5.0%)</td></tr><tr><td class="AutoAnnotatorInnerAmino">Leu (L)</td><td class="AutoAnnotatorInnerAmino">41 (11.4%)</td></tr><tr><td class="AutoAnnotatorInnerAmino">Lys (K)</td><td class="AutoAnnotatorInnerAmino">11 (3.1%)</td></tr></table></td><td class="AutoAnnotatorOuterAmino"><table class="AutoAnnotatorWithBorder"><tr><td class="AutoAnnotatorInnerAmino">Met (M)</td><td class="AutoAnnotatorInnerAmino">10 (2.8%)</td></tr><tr><td class="AutoAnnotatorInnerAmino">Phe (F)</td><td class="AutoAnnotatorInnerAmino">4 (1.1%)</td></tr><tr><td class="AutoAnnotatorInnerAmino">Pro (P)</td><td class="AutoAnnotatorInnerAmino">14 (3.9%)</td></tr><tr><td class="AutoAnnotatorInnerAmino">Ser (S)</td><td class="AutoAnnotatorInnerAmino">32 (8.9%)</td></tr></table></td><td class="AutoAnnotatorOuterAmino"><table class="AutoAnnotatorWithBorder"><tr><td class="AutoAnnotatorInnerAmino">Thr (T)</td><td class="AutoAnnotatorInnerAmino">19 (5.3%)</td></tr><tr><td class="AutoAnnotatorInnerAmino">Trp (W)</td><td class="AutoAnnotatorInnerAmino">2 (0.6%)</td></tr><tr><td class="AutoAnnotatorInnerAmino">Tyr (Y)</td><td class="AutoAnnotatorInnerAmino">8 (2.2%)</td></tr><tr><td class="AutoAnnotatorInnerAmino">Val (V)</td><td class="AutoAnnotatorInnerAmino">34 (9.4%)</td></tr></table></td></tr></table></td></tr><tr><td class="AutoAnnotatorAminoCountingOuter"><strong>Amino acid counting</strong><table class="AutoAnnotatorNoBorder"><tr><td class="AutoAnnotatorAminoCountingInner1"></td><td class="AutoAnnotatorAminoCountingInner2">Total number:</td><td class="AutoAnnotatorAminoCountingInner3">360</td></tr><tr><td class="AutoAnnotatorAminoCountingInner1"></td><td class="AutoAnnotatorAminoCountingInner2">Positively charged (Arg+Lys):</td><td class="AutoAnnotatorAminoCountingInner3">30 (8.3%)</td></tr><tr><td class="AutoAnnotatorAminoCountingInner1"></td><td class="AutoAnnotatorAminoCountingInner2">Negatively charged (Asp+Glu):</td><td class="AutoAnnotatorAminoCountingInner3">32 (8.9%)</td></tr><tr><td class="AutoAnnotatorAminoCountingInner1"></td><td class="AutoAnnotatorAminoCountingInner2">Aromatic (Phe+His+Try+Tyr):</td><td class="AutoAnnotatorAminoCountingInner3">21 (5.8%)</td></tr></table></td><td class="AutoAnnotatorBiochemParOuter"><strong>Biochemical parameters</strong><table class="AutoAnnotatorNoBorder"><tr><td class="AutoAnnotatorBiochemParInner1"></td><td class="AutoAnnotatorBiochemParInner2">Atomic composition:</td><td class="AutoAnnotatorBiochemParInner3">C<sub>1684</sub>H<sub>2762</sub>N<sub>484</sub>O<sub>524</sub>S<sub>13</sub></td></tr><tr><td class="AutoAnnotatorBiochemParInner1"></td><td class="AutoAnnotatorBiochemParInner2">Molecular mass [Da]:</td><td class="AutoAnnotatorBiochemParInner3">38590.2</td></tr><tr><td class="AutoAnnotatorBiochemParInner1"></td><td class="AutoAnnotatorBiochemParInner2">Theoretical pI:</td><td class="AutoAnnotatorBiochemParInner3">6.39</td></tr><tr><td class="AutoAnnotatorBiochemParInner1"></td><td class="AutoAnnotatorBiochemParInner2">Extinction coefficient at 280 nm [M<sup>-1</sup> cm<sup>-1</sup>]:</td><td class="AutoAnnotatorBiochemParInner3">22920 / 23108 (all Cys red/ox)</td></tr></table></td></tr><tr><td class="AutoAnnotator1col" colspan="2"><strong>Plot for hydrophobicity, charge, predicted secondary structure, solvent accessability, transmembrane helices and disulfid bridges</strong> <input type='button' id='hydrophobicity_charge_button' onclick='show_or_hide_plot_1382695602201()' value='Show'><span id="hydrophobicity_charge_explanation"></span><div id="hydrophobicity_charge_container" style='display:none'><div id="hydrophobicity_charge_placeholder0" style="width:100%;height:150px"></div><div id="hydrophobicity_charge_placeholder1" style="width:100%;height:150px"></div></div></td></tr><tr><td class="AutoAnnotator1col" colspan="2"><strong>Codon usage</strong><table class="AutoAnnotatorNoBorder"><tr><td class="AutoAnnotatorCodonUsage1"></td><td class="AutoAnnotatorCodonUsage2">Organism:</td><td class="AutoAnnotatorCodonUsage3"><i>E. coli</i></td><td class="AutoAnnotatorCodonUsage3"><i>B. subtilis</i></td><td class="AutoAnnotatorCodonUsage3"><i>S. cerevisiae</i></td><td class="AutoAnnotatorCodonUsage3"><i>A. thaliana</i></td><td class="AutoAnnotatorCodonUsage3"><i>P. patens</i></td><td class="AutoAnnotatorCodonUsage3">Mammals</td></tr><tr><td class="AutoAnnotatorCodonUsage1"></td><td class="AutoAnnotatorCodonUsage2">Codon quality (<a href="http://en.wikipedia.org/wiki/Codon_Adaptation_Index">CAI</a>):</td><td class="AutoAnnotatorCodonUsage3">good (0.79)</td><td class="AutoAnnotatorCodonUsage3">good (0.78)</td><td class="AutoAnnotatorCodonUsage3">acceptable (0.55)</td><td class="AutoAnnotatorCodonUsage3">good (0.60)</td><td class="AutoAnnotatorCodonUsage3">good (0.78)</td><td class="AutoAnnotatorCodonUsage3">good (0.66)</td></tr></table></td></tr><tr><td class="AutoAnnotator1col" colspan="2"><strong>Alignments</strong> (obtained from <a href='http://predictprotein.org'>PredictProtein.org</a>)<table class="AutoAnnotatorNoBorder"><tr><td class="AutoAnnotatorAlignment1"></td><td class="AutoAnnotatorAlignment2">SwissProt:</td><td class="AutoAnnotatorAlignment3"><a href='http://www.uniprot.org/uniprot/P03023'>P03023</a> (100% identity on 360 AAs), <a href='http://www.uniprot.org/uniprot/Q9CN88'>Q9CN88</a> (32% identity on 325 AAs)</td></tr><tr><td class="AutoAnnotatorAlignment1"></td><td class="AutoAnnotatorAlignment2">TrEML:</td><td class="AutoAnnotatorAlignment3"><a href='http://www.uniprot.org/uniprot/D8E1B5'>D8E1B5</a> (100% identity on 359 AAs), <a href='http://www.uniprot.org/uniprot/E3PES2'>E3PES2</a> (100% identity on 360 AAs), <a href='http://www.uniprot.org/uniprot/C6EJI7'>C6EJI7</a> (100% identity on 359 AAs), <a href='http://www.uniprot.org/uniprot/Q3Z584'>Q3Z584</a> (100% identity on 360 AAs), <a href='http://www.uniprot.org/uniprot/C6UB29'>C6UB29</a> (100% identity on 360 AAs), <a href='http://www.uniprot.org/uniprot/C6ZCU4'>C6ZCU4</a> (100% identity on 360 AAs), <a href='http://www.uniprot.org/uniprot/C9QQT3'>C9QQT3</a> (100% identity on 359 AAs), <a href='http://www.uniprot.org/uniprot/G2F6I6'>G2F6I6</a> (100% identity on 360 AAs), <a href='http://www.uniprot.org/uniprot/G2CUK7'>G2CUK7</a> (100% identity on 360 AAs), <a href='http://www.uniprot.org/uniprot/G2CFY7'>G2CFY7</a> (100% identity on 360 AAs)</td></tr><tr><td class="AutoAnnotatorAlignment1"></td><td class="AutoAnnotatorAlignment2">PDB:</td><td class="AutoAnnotatorAlignment3"><a href='http://www.rcsb.org/pdb/explore/explore.do?structureId=1lbg'>1lbg</a> (99% identity on 357 AAs)</td></tr></table></td></tr><tr><th id='AutoAnnotatorHeader' colspan="2"><strong>Predictions</strong> (obtained from <a href='http://predictprotein.org'>PredictProtein.org</a>)</th></tr><tr><td class="AutoAnnotatorLocalizationOuter"><strong>Subcellular Localization</strong> (reliability in brackets)<table class="AutoAnnotatorNoBorder"><tr><td class="AutoAnnotatorLocalization1"></td><td class="AutoAnnotatorLocalization2">Archaea:</td><td class="AutoAnnotatorLocalization3">cytosol (100%)</td></tr><tr><td class="AutoAnnotatorLocalization1"></td><td class="AutoAnnotatorLocalization2">Bacteria:</td><td class="AutoAnnotatorLocalization3">cytosol (99%)</td></tr><tr><td class="AutoAnnotatorLocalization1"></td><td class="AutoAnnotatorLocalization2">Eukarya:</td><td class="AutoAnnotatorLocalization3">mitochondria (61%)</td></tr></table></td><td class="AutoAnnotatorGOOuter"><strong>Gene Ontology</strong> (reliability in brackets)<br><table class="AutoAnnotatorNoBorder"><tr><td class='AutoAnnotatorGO1'></td><td class='AutoAnnotatorGO2'>Molecular Function Ontology:</td><td class='AutoAnnotatorGO3'><a href='http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0043565'>GO:0043565</a> (25%), <a href='http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0003700'>GO:0003700</a> (29%)</td></tr><tr><td class='AutoAnnotatorGO1'></td><td class='AutoAnnotatorGO2'>Biological Process Ontology:</td><td class='AutoAnnotatorGO3'><a href='http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0006355'>GO:0006355</a> (34%), <a href='http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:0045449'>GO:0045449</a> (18%)</td></tr><tr><td class='AutoAnnotatorGO1'> </td><td class='AutoAnnotatorGO2'> </td><td class='AutoAnnotatorGO3'> </td></tr></table></td></tr><tr><td class="AutoAnnotator1col" colspan="2"><strong>Predicted features:</strong><table class="AutoAnnotatorNoBorder"><tr><td class="AutoAnnotatorPredFeat1"></td><td class="AutoAnnotatorPredFeat2a">Disulfid bridges:</td><td class="AutoAnnotatorPredFeat3"> - </td></tr><tr><td class="AutoAnnotatorPredFeat1"></td><td class="AutoAnnotatorPredFeat2a">Transmembrane helices:</td><td class="AutoAnnotatorPredFeat3"> - </td></tr></table></td></tr><tr><td class="AutoAnnotator1col" colspan="2"> The BioBrick-AutoAnnotator was created by <a href="http://2013.igem.org/Team:TU-Munich">TU-Munich 2013</a> iGEM team. For more information please see the <a href="http://2013.igem.org/Team:TU-Munich/Results/Software">documentation</a>.<br>If you have any questions, comments or suggestions, please leave us a <a href="http://2013.igem.org/Team:TU-Munich/Results/AutoAnnotator">comment</a>.</td></tr></table></div><br><!-- IMPORTANT: DON'T REMOVE THIS LINE, OTHERWISE NOT SUPPORTED FOR IE BEFORE 9 --><!--[if lte IE 8]><script language="javascript" type="text/javascript" src="http://2013.igem.org/Team:TU-Munich/excanvas.js"></script><![endif]--><script type='text/javascript' src='http://code.jquery.com/jquery-1.10.0.min.js'></script><script type='text/javascript' src='http://2013.igem.org/Team:TU-Munich/Flot.js?action=raw&ctype=text/js'></script><script>function show_or_hide_plot_1382695602201(){hydrophobicity_datapoints = [[2.5,-0.02],[3.5,0.36],[4.5,0.88],[5.5,0.50],[6.5,0.50],[7.5,1.00],[8.5,-0.46],[9.5,-0.46],[10.5,0.60],[11.5,-0.32],[12.5,0.16],[13.5,0.70],[14.5,0.70],[15.5,-0.36],[16.5,-0.42],[17.5,-0.42],[18.5,-0.42],[19.5,-1.06],[20.5,0.48],[21.5,1.46],[22.5,-0.08],[23.5,-0.62],[24.5,0.64],[25.5,-0.36],[26.5,-1.84],[27.5,-0.30],[28.5,0.24],[29.5,0.24],[30.5,-0.38],[31.5,0.12],[32.5,-1.62],[33.5,-2.16],[34.5,-3.30],[35.5,-1.68],[36.5,-2.24],[37.5,-0.98],[38.5,0.08],[39.5,1.24],[40.5,0.76],[41.5,0.76],[42.5,1.16],[43.5,0.10],[44.5,-0.54],[45.5,0.00],[46.5,0.38],[47.5,-1.08],[48.5,-1.28],[49.5,-0.18],[50.5,-0.72],[51.5,-1.10],[52.5,-1.10],[53.5,0.56],[54.5,0.08],[55.5,-0.36],[56.5,-0.44],[57.5,-0.44],[58.5,-1.36],[59.5,-0.96],[60.5,-0.12],[61.5,1.56],[62.5,2.18],[63.5,3.18],[64.5,2.78],[65.5,1.88],[66.5,0.82],[67.5,0.74],[68.5,0.66],[69.5,0.66],[70.5,1.56],[71.5,1.08],[72.5,1.60],[73.5,0.52],[74.5,0.00],[75.5,-1.46],[76.5,0.08],[77.5,0.56],[78.5,1.24],[79.5,1.76],[80.5,3.36],[81.5,1.68],[82.5,0.68],[83.5,-0.58],[84.5,-0.58],[85.5,-2.18],[86.5,-2.10],[87.5,-1.18],[88.5,-0.36],[89.5,-0.36],[90.5,0.18],[91.5,1.72],[92.5,1.80],[93.5,2.72],[94.5,2.20],[95.5,2.74],[96.5,2.74],[97.5,1.20],[98.5,-0.54],[99.5,-0.54],[100.5,-1.00],[101.5,-1.00],[102.5,-1.00],[103.5,0.26],[104.5,0.92],[105.5,0.22],[106.5,-0.26],[107.5,0.80],[108.5,1.28],[109.5,0.14],[110.5,0.22],[111.5,0.62],[112.5,1.02],[113.5,0.54],[114.5,0.48],[115.5,0.28],[116.5,0.36],[117.5,-0.56],[118.5,-1.00],[119.5,0.46],[120.5,2.26],[121.5,2.32],[122.5,1.78],[123.5,1.60],[124.5,0.52],[125.5,0.38],[126.5,-1.22],[127.5,-1.22],[128.5,-1.66],[129.5,-2.04],[130.5,-2.44],[131.5,-0.84],[132.5,0.22],[133.5,1.76],[134.5,1.76],[135.5,1.76],[136.5,1.22],[137.5,1.36],[138.5,0.38],[139.5,0.38],[140.5,0.86],[141.5,0.18],[142.5,0.04],[143.5,0.94],[144.5,2.20],[145.5,2.12],[146.5,1.74],[147.5,2.22],[148.5,1.30],[149.5,0.04],[150.5,-1.42],[151.5,-0.86],[152.5,-2.02],[153.5,-0.96],[154.5,-0.96],[155.5,-0.42],[156.5,0.62],[157.5,1.84],[158.5,1.50],[159.5,2.04],[160.5,1.56],[161.5,-0.04],[162.5,-1.64],[163.5,-2.28],[164.5,-2.26],[165.5,-2.52],[166.5,-1.06],[167.5,-0.44],[168.5,0.48],[169.5,-0.08],[170.5,0.18],[171.5,0.18],[172.5,1.10],[173.5,0.62],[174.5,2.08],[175.5,2.64],[176.5,1.24],[177.5,-0.30],[178.5,-1.36],[179.5,-1.22],[180.5,-0.78],[181.5,0.62],[182.5,2.08],[183.5,3.14],[184.5,2.16],[185.5,1.48],[186.5,1.48],[187.5,0.56],[188.5,0.04],[189.5,0.96],[190.5,1.12],[191.5,0.72],[192.5,-0.02],[193.5,0.90],[194.5,-0.84],[195.5,0.08],[196.5,0.08],[197.5,0.90],[198.5,-0.04],[199.5,0.22],[200.5,-1.32],[201.5,-1.94],[202.5,-1.10],[203.5,-1.06],[204.5,-1.32],[205.5,-1.24],[206.5,-1.68],[207.5,-1.54],[208.5,-2.10],[209.5,-1.52],[210.5,0.08],[211.5,1.14],[212.5,-0.46],[213.5,-0.66],[214.5,-1.04],[215.5,-2.02],[216.5,-3.08],[217.5,-2.56],[218.5,-1.82],[219.5,-0.76],[220.5,-0.30],[221.5,0.24],[222.5,0.34],[223.5,1.06],[224.5,0.00],[225.5,-1.08],[226.5,-1.06],[227.5,-0.60],[228.5,-1.86],[229.5,-0.78],[230.5,0.68],[231.5,0.12],[232.5,-0.96],[233.5,-0.34],[234.5,0.18],[235.5,0.26],[236.5,0.64],[237.5,1.20],[238.5,1.64],[239.5,1.12],[240.5,1.04],[241.5,2.20],[242.5,2.70],[243.5,1.64],[244.5,0.56],[245.5,-0.90],[246.5,-1.36],[247.5,-1.36],[248.5,0.10],[249.5,0.72],[250.5,1.78],[251.5,1.78],[252.5,0.52],[253.5,0.12],[254.5,1.10],[255.5,0.60],[256.5,-0.48],[257.5,0.26],[258.5,-0.18],[259.5,-0.32],[260.5,-1.08],[261.5,0.46],[262.5,0.54],[263.5,0.98],[264.5,-0.48],[265.5,1.32],[266.5,0.32],[267.5,1.24],[268.5,1.72],[269.5,2.34],[270.5,1.18],[271.5,0.64],[272.5,-0.90],[273.5,-1.88],[274.5,-2.50],[275.5,-2.94],[276.5,-2.40],[277.5,-1.86],[278.5,-1.22],[279.5,-0.78],[280.5,0.82],[281.5,0.66],[282.5,0.50],[283.5,0.76],[284.5,0.88],[285.5,-0.16],[286.5,1.06],[287.5,0.60],[288.5,-0.86],[289.5,-1.42],[290.5,-0.72],[291.5,-2.52],[292.5,-0.98],[293.5,0.48],[294.5,1.10],[295.5,-0.16],[296.5,0.60],[297.5,-0.32],[298.5,-0.24],[299.5,-0.86],[300.5,-1.06],[301.5,-0.16],[302.5,0.76],[303.5,-0.78],[304.5,0.68],[305.5,1.42],[306.5,-0.04],[307.5,-0.88],[308.5,-0.88],[309.5,-1.28],[310.5,-0.28],[311.5,-0.36],[312.5,-0.36],[313.5,-0.36],[314.5,-1.42],[315.5,-1.50],[316.5,0.04],[317.5,-0.20],[318.5,1.34],[319.5,1.88],[320.5,1.88],[321.5,1.96],[322.5,1.50],[323.5,-0.24],[324.5,-0.86],[325.5,-1.76],[326.5,-2.74],[327.5,-1.20],[328.5,0.06],[329.5,0.52],[330.5,-0.04],[331.5,-0.04],[332.5,-1.50],[333.5,-2.00],[334.5,-1.32],[335.5,-0.78],[336.5,-0.96],[337.5,-1.16],[338.5,-0.66],[339.5,-0.26],[340.5,0.26],[341.5,-0.12],[342.5,0.62],[343.5,1.02],[344.5,0.64],[345.5,-0.42],[346.5,1.04],[347.5,1.56],[348.5,-0.10],[349.5,-1.18],[350.5,0.36],[351.5,-0.56],[352.5,-1.82],[353.5,-0.16],[354.5,-0.16],[355.5,-1.16],[356.5,-1.08],[357.5,-0.88]];charge_datapoints = [[2.5,0.20],[3.5,0.20],[4.5,0.00],[5.5,-0.20],[6.5,-0.20],[7.5,-0.20],[8.5,-0.40],[9.5,-0.40],[10.5,-0.20],[11.5,-0.20],[12.5,-0.20],[13.5,0.00],[14.5,0.00],[15.5,0.00],[16.5,0.00],[17.5,0.00],[18.5,0.00],[19.5,0.20],[20.5,0.20],[21.5,0.20],[22.5,0.20],[23.5,0.20],[24.5,0.00],[25.5,0.00],[26.5,0.10],[27.5,0.10],[28.5,0.10],[29.5,0.10],[30.5,0.30],[31.5,0.20],[32.5,0.40],[33.5,0.20],[34.5,0.40],[35.5,0.20],[36.5,0.00],[37.5,-0.20],[38.5,0.00],[39.5,-0.20],[40.5,-0.20],[41.5,-0.20],[42.5,-0.20],[43.5,-0.20],[44.5,-0.20],[45.5,-0.20],[46.5,0.00],[47.5,0.00],[48.5,0.20],[49.5,0.20],[50.5,0.20],[51.5,0.20],[52.5,0.20],[53.5,0.00],[54.5,0.00],[55.5,0.00],[56.5,0.20],[57.5,0.20],[58.5,0.20],[59.5,0.20],[60.5,0.20],[61.5,0.00],[62.5,0.00],[63.5,0.00],[64.5,0.00],[65.5,0.00],[66.5,0.00],[67.5,0.00],[68.5,0.00],[69.5,0.00],[70.5,0.00],[71.5,0.10],[72.5,0.10],[73.5,0.10],[74.5,0.10],[75.5,0.10],[76.5,0.00],[77.5,0.00],[78.5,0.00],[79.5,0.00],[80.5,0.00],[81.5,0.20],[82.5,0.20],[83.5,0.40],[84.5,0.40],[85.5,0.20],[86.5,0.00],[87.5,0.00],[88.5,-0.20],[89.5,-0.20],[90.5,0.00],[91.5,0.00],[92.5,0.00],[93.5,0.00],[94.5,0.00],[95.5,0.00],[96.5,0.00],[97.5,-0.20],[98.5,0.00],[99.5,0.00],[100.5,0.00],[101.5,0.00],[102.5,0.00],[103.5,-0.20],[104.5,-0.20],[105.5,0.00],[106.5,0.00],[107.5,0.20],[108.5,0.20],[109.5,0.30],[110.5,0.10],[111.5,0.10],[112.5,0.10],[113.5,0.10],[114.5,0.00],[115.5,0.20],[116.5,0.20],[117.5,0.20],[118.5,0.20],[119.5,0.20],[120.5,0.00],[121.5,0.00],[122.5,0.00],[123.5,0.00],[124.5,0.00],[125.5,0.00],[126.5,-0.20],[127.5,-0.40],[128.5,-0.40],[129.5,-0.60],[130.5,-0.60],[131.5,-0.40],[132.5,-0.20],[133.5,-0.20],[134.5,-0.20],[135.5,-0.20],[136.5,-0.20],[137.5,-0.20],[138.5,-0.20],[139.5,-0.00],[140.5,-0.00],[141.5,-0.00],[142.5,-0.00],[143.5,-0.00],[144.5,-0.00],[145.5,-0.00],[146.5,-0.20],[147.5,-0.20],[148.5,-0.20],[149.5,-0.40],[150.5,-0.40],[151.5,-0.20],[152.5,-0.20],[153.5,-0.20],[154.5,-0.00],[155.5,-0.00],[156.5,-0.00],[157.5,-0.00],[158.5,-0.00],[159.5,-0.00],[160.5,0.10],[161.5,-0.10],[162.5,-0.30],[163.5,-0.30],[164.5,-0.30],[165.5,-0.20],[166.5,0.00],[167.5,0.20],[168.5,0.20],[169.5,0.00],[170.5,-0.10],[171.5,-0.10],[172.5,-0.10],[173.5,-0.10],[174.5,0.10],[175.5,0.00],[176.5,0.10],[177.5,0.10],[178.5,0.10],[179.5,0.10],[180.5,0.10],[181.5,0.00],[182.5,0.00],[183.5,0.00],[184.5,0.00],[185.5,0.00],[186.5,0.00],[187.5,0.00],[188.5,0.00],[189.5,0.00],[190.5,0.00],[191.5,0.00],[192.5,0.20],[193.5,0.20],[194.5,0.40],[195.5,0.40],[196.5,0.40],[197.5,0.20],[198.5,0.20],[199.5,0.10],[200.5,0.30],[201.5,0.30],[202.5,0.30],[203.5,0.30],[204.5,0.40],[205.5,0.20],[206.5,0.20],[207.5,0.20],[208.5,0.20],[209.5,0.00],[210.5,0.00],[211.5,0.00],[212.5,-0.20],[213.5,0.00],[214.5,-0.20],[215.5,-0.20],[216.5,-0.40],[217.5,-0.20],[218.5,-0.40],[219.5,-0.20],[220.5,-0.20],[221.5,0.00],[222.5,0.00],[223.5,0.00],[224.5,0.00],[225.5,0.00],[226.5,0.00],[227.5,0.00],[228.5,0.00],[229.5,0.00],[230.5,0.00],[231.5,0.00],[232.5,-0.20],[233.5,-0.20],[234.5,-0.20],[235.5,-0.20],[236.5,-0.20],[237.5,0.00],[238.5,0.00],[239.5,0.00],[240.5,0.00],[241.5,0.00],[242.5,0.00],[243.5,0.00],[244.5,-0.20],[245.5,-0.20],[246.5,-0.20],[247.5,-0.20],[248.5,-0.20],[249.5,0.00],[250.5,0.00],[251.5,0.00],[252.5,0.20],[253.5,0.20],[254.5,0.20],[255.5,0.20],[256.5,0.00],[257.5,-0.20],[258.5,-0.20],[259.5,-0.20],[260.5,0.00],[261.5,0.20],[262.5,0.20],[263.5,0.20],[264.5,0.00],[265.5,-0.20],[266.5,-0.20],[267.5,-0.20],[268.5,-0.20],[269.5,0.00],[270.5,0.00],[271.5,-0.20],[272.5,-0.40],[273.5,-0.40],[274.5,-0.60],[275.5,-0.80],[276.5,-0.60],[277.5,-0.40],[278.5,-0.40],[279.5,-0.20],[280.5,-0.00],[281.5,-0.00],[282.5,-0.00],[283.5,-0.00],[284.5,-0.00],[285.5,-0.00],[286.5,-0.00],[287.5,0.20],[288.5,0.20],[289.5,-0.00],[290.5,-0.00],[291.5,0.20],[292.5,-0.00],[293.5,-0.00],[294.5,0.20],[295.5,0.20],[296.5,-0.00],[297.5,-0.00],[298.5,-0.00],[299.5,-0.20],[300.5,-0.00],[301.5,-0.00],[302.5,-0.00],[303.5,-0.00],[304.5,0.20],[305.5,-0.00],[306.5,-0.00],[307.5,-0.00],[308.5,-0.00],[309.5,-0.00],[310.5,-0.00],[311.5,0.20],[312.5,0.20],[313.5,0.20],[314.5,0.20],[315.5,0.20],[316.5,-0.00],[317.5,-0.00],[318.5,-0.00],[319.5,-0.00],[320.5,-0.00],[321.5,-0.00],[322.5,0.20],[323.5,0.40],[324.5,0.60],[325.5,0.60],[326.5,0.60],[327.5,0.40],[328.5,0.20],[329.5,-0.00],[330.5,-0.00],[331.5,-0.00],[332.5,-0.00],[333.5,-0.00],[334.5,-0.00],[335.5,-0.00],[336.5,-0.00],[337.5,0.20],[338.5,0.20],[339.5,0.20],[340.5,0.20],[341.5,-0.00],[342.5,-0.20],[343.5,-0.20],[344.5,-0.20],[345.5,-0.20],[346.5,-0.00],[347.5,-0.00],[348.5,0.20],[349.5,0.20],[350.5,0.20],[351.5,0.20],[352.5,0.40],[353.5,0.20],[354.5,-0.00],[355.5,-0.00],[356.5,-0.00],[357.5,-0.20]];dis_datapoints = [];trans_datapoints = [];sec_helix_datapoints = [[6,12],[17,23],[32,45],[50,57],[74,89],[104,116],[132,140],[164,177],[194,200],[201,207],[222,234],[247,259],[278,280],[293,308],[344,357]];sec_strand_datapoints = [[63,68],[93,98],[121,126],[145,149],[158,161],[181,186],[214,217],[241,245],[268,272],[287,289],[317,326]];acc_exposed_datapoints = [[1,3],[7,8],[11,12],[14,14],[25,29],[32,33],[36,36],[40,40],[43,44],[46,46],[54,54],[58,61],[72,72],[81,81],[85,85],[88,89],[91,91],[100,106],[109,109],[112,112],[116,117],[128,133],[136,136],[139,140],[142,142],[152,155],[165,165],[176,176],[190,190],[193,193],[199,199],[203,203],[206,207],[209,209],[211,212],[219,219],[221,221],[223,224],[227,227],[231,231],[234,238],[259,259],[261,261],[263,263],[277,277],[280,280],[285,285],[294,295],[306,306],[309,312],[314,316],[327,327],[329,329],[333,341],[344,345],[348,348],[351,352],[354,355],[357,360]];acc_buried_datapoints = [[6,6],[9,10],[13,13],[15,16],[18,21],[23,24],[30,30],[34,34],[38,38],[41,42],[49,50],[52,53],[56,56],[63,69],[71,71],[75,77],[79,80],[82,83],[87,87],[92,92],[94,99],[107,107],[110,111],[114,115],[119,126],[138,138],[143,148],[150,150],[159,161],[163,163],[166,167],[170,171],[174,175],[178,179],[181,187],[194,194],[197,198],[200,200],[201,201],[204,205],[210,210],[225,225],[228,230],[232,233],[239,239],[241,254],[256,257],[264,265],[268,273],[275,276],[278,279],[282,282],[284,284],[286,289],[293,293],[296,297],[300,301],[304,305],[308,308],[319,319],[321,321],[323,324],[328,328],[346,346],[350,350],[353,353],[356,356]];flot_plot_options = []; flot_plot_options[0] = {grid: {borderWidth: {top: 0,right: 0,bottom: 0,left: 0}},legend: {show: false},xaxes: [{show: true,min: 0,max: 200,ticks: [[0.5, '1'], [24.5, '25'], [49.5, '50'], [74.5, '75'], [99.5, '100'], [124.5, '125'], [149.5, '150'], [174.5, '175'], [199.5, '200']],tickLength: -5}],yaxes: [{show: true,ticks: [[0, '0'], [4.5,'hydro-<br>phobic '], [-4.5,'hydro-<br>philic ']],min: -4.5,max: +4.5,font: {size: 12,lineHeight: 14,style: 'italic',weight: 'bold',family: 'sans-serif',variant: 'small-caps',color: 'rgba(100,149,237,1)'}},{show: true,ticks: [[0, ''], [1,'positive<br> charge'], [-1,'negative<br> charge']],position: 'right',min: -1,max: 1,font: {size: 12,lineHeight: 14,style: 'italic',weight: 'bold',family: 'sans-serif',variant: 'small-caps',color: 'rgba(255,99,71,1)'}}]};number_of_plots = 2;for ( plot_num = 1 ; plot_num < number_of_plots ; plot_num ++){flot_plot_options[plot_num] = $.extend(true, {} ,flot_plot_options[0]);flot_plot_options[plot_num].xaxes = [{min: plot_num*200,max: (plot_num + 1)*200,ticks: [ [plot_num*200 + 0.5, (plot_num*200 + 1).toString()], [plot_num*200 + 24.5, (plot_num*200 + 25).toString()], [plot_num*200 + 49.5, (plot_num*200 + 50).toString()], [plot_num*200 + 74.5, (plot_num*200 + 75).toString()], [plot_num*200 + 99.5, (plot_num*200 + 100).toString()], [plot_num*200 + 124.5, (plot_num*200 + 125).toString()], [plot_num*200 + 149.5, (plot_num*200 + 150).toString()], [plot_num*200 + 174.5, (plot_num*200 + 175).toString()], [plot_num*200 + 199.5, (plot_num*200 + 200).toString()] ],tickLength: -5}];};try {if( $('#AutoAnnotator_container_1382695602201 #hydrophobicity_charge_button').val() =='Show' ){$('#AutoAnnotator_container_1382695602201 #hydrophobicity_charge_container').css('display','block');$('#AutoAnnotator_container_1382695602201 #hydrophobicity_charge_button').val('Hide');var description_html = '<div id=\'AutoAnnotator_plot_selectors\'>';description_html = description_html + '<br> <input type=\'checkbox\' id=\'hydrophobicity_checkbox\' checked=\'checked\'> Moving average over 5 amino acids for hydrophobicity (<img src=\'https://static.igem.org/mediawiki/2013/e/e9/TUM13_hydrophobicity_icon.png\' alt=\'blue graph\' height=\'10\'></img>)';description_html = description_html + '<br> <input type=\'checkbox\' id=\'charge_checkbox\' checked=\'checked\'> Moving average over 5 amino acids for charge (<img src=\'https://static.igem.org/mediawiki/2013/3/3e/TUM13_charge_icon.png\' alt=\'red graph\' height=\'10\'></img>)';description_html = description_html + '<br> <input type=\'checkbox\' id=\'dis_checkbox\' checked=\'checked\'> Predicted disulfid bridges (<img src=\'https://static.igem.org/mediawiki/2013/2/28/TUM13_dis_icon.png\' alt=\'yellow circle\' height=\'10\'></img>) with the number of the bridge in the center';description_html = description_html + '<br> <input type=\'checkbox\' id=\'trans_checkbox\' checked=\'checked\'> Predicted transmembrane helices (<img src=\'https://static.igem.org/mediawiki/2013/7/78/TUM13_trans_icon.png\' alt=\'turquois bars\' height=\'10\'></img>)';description_html = description_html + '<br> <input type=\'checkbox\' id=\'sec_checkbox\' checked=\'checked\'> Predicted secondary structure: Helices (<img src=\'https://static.igem.org/mediawiki/2013/b/bf/TUM13_helix_icon.png\' alt=\'violet bars\' height=\'10\'></img>) and beta-strands (<img src=\'https://static.igem.org/mediawiki/2013/b/bf/TUM13_strand_icon.png\' alt=\'yellow bars\' height=\'10\'></img>)';description_html = description_html + '<br> <input type=\'checkbox\' id=\'acc_checkbox\' checked=\'checked\'> Predicted solvent accessability: Exposed (<img src=\'https://static.igem.org/mediawiki/2013/1/16/TUM13_exposed_icon.png\' alt=\'blue bars\' height=\'10\'></img>) and buried (<img src=\'https://static.igem.org/mediawiki/2013/0/0b/TUM13_buried_icon.png\' alt=\'green bars\' height=\'10\'></img>) residues';description_html = description_html + '<br></div>';$('#AutoAnnotator_container_1382695602201 #hydrophobicity_charge_explanation').html(description_html);plot_according_to_selectors_1382695602201();$('#AutoAnnotator_container_1382695602201 #AutoAnnotator_plot_selectors').find('input').click(plot_according_to_selectors_1382695602201);}else{$('#AutoAnnotator_container_1382695602201 #hydrophobicity_charge_container').css('display','none');$('#AutoAnnotator_container_1382695602201 #hydrophobicity_charge_button').val('Show');$('#AutoAnnotator_container_1382695602201 #hydrophobicity_charge_explanation').html('');}}catch(err){txt='There was an error with the button controlling the visibility of the plot.\n';txt=txt+'The originating error is:\n' + err + '\n\n';alert(txt);}};function plot_according_to_selectors_1382695602201(){try{var plot_datasets = [[],[]];if($('#AutoAnnotator_container_1382695602201 #hydrophobicity_checkbox').prop('checked') == true){plot_datasets[0] = { color: 'rgba(100,149,237,1)',data: hydrophobicity_datapoints,label: 'Hydrophobicity',lines: { show: true, fill: true, fillColor: 'rgba(100,149,237,0.1)' },yaxis: 1};}if($('#AutoAnnotator_container_1382695602201 #charge_checkbox').prop('checked') == true){plot_datasets[1] = {color: 'rgba(255,99,71,1)',data: charge_datapoints,label: 'Charge',lines: { show: true, fill: true, fillColor: 'rgba(255,99,71,0.1)' },yaxis: 2};}for (plot_num = 0 ; plot_num < number_of_plots ; plot_num ++){$.plot('#AutoAnnotator_container_1382695602201 #hydrophobicity_charge_placeholder'+ plot_num.toString(), plot_datasets, flot_plot_options[plot_num] );}var screen_width = $('canvas.flot-base').width(); var pos_of_first_tick = 46;var pos_of_last_tick = screen_width - 51;var tick_diff = (screen_width - 97)/199;if($('#AutoAnnotator_container_1382695602201 #dis_checkbox').prop('checked') == true){for ( j = 0 ; j < dis_datapoints.length ; j++ ){$('#AutoAnnotator_container_1382695602201 #hydrophobicity_charge_placeholder' + Math.floor((dis_datapoints[j][0] - 1)/200) ).append('<div class=\'AutoAnnotator_dis\' style=\'left:' + ((pos_of_first_tick - 8 + (dis_datapoints[j][0] - 1)*tick_diff - Math.floor((dis_datapoints[j][0] - 1)/200)*200*tick_diff).toFixed(0)).toString() + 'px;\'><b>' + (j+1) + '</b></div>');$('#AutoAnnotator_container_1382695602201 #hydrophobicity_charge_placeholder' + Math.floor((dis_datapoints[j][1] - 1)/200) ).append('<div class=\'AutoAnnotator_dis\' style=\'left:' + ((pos_of_first_tick - 8 + (dis_datapoints[j][1] - 1)*tick_diff - Math.floor((dis_datapoints[j][1] - 1)/200)*200*tick_diff).toFixed(0)).toString() + 'px;\'><b>' + (j+1) + '</b></div>');}}if($('#AutoAnnotator_container_1382695602201 #trans_checkbox').prop('checked') == true){for ( j = 0 ; j < trans_datapoints.length ; j++ ){$('#AutoAnnotator_container_1382695602201 #hydrophobicity_charge_placeholder' + Math.floor((trans_datapoints[j][0] - 1)/200) ).append('<div class=\'AutoAnnotator_trans\' style=\'width:' + (((trans_datapoints[j][1] - trans_datapoints[j][0] + 1)*tick_diff).toFixed(0)).toString() + 'px ;left:' + ((pos_of_first_tick + (trans_datapoints[j][0] - 1.5)*tick_diff - Math.floor((trans_datapoints[j][0] - 1)/200)*200*tick_diff).toFixed(0)).toString() + 'px\'></div>');}}if($('#AutoAnnotator_container_1382695602201 #sec_checkbox').prop('checked') == true){for ( j = 0 ; j < sec_helix_datapoints.length ; j++ ){$('#AutoAnnotator_container_1382695602201 #hydrophobicity_charge_placeholder' + Math.floor((sec_helix_datapoints[j][0] - 1)/200) ).append('<div class=\'AutoAnnotator_sec_helix\' style=\'width:' + (((sec_helix_datapoints[j][1] - sec_helix_datapoints[j][0] + 1)*tick_diff).toFixed(0)).toString() + 'px; left:' + ((pos_of_first_tick + (sec_helix_datapoints[j][0] - 1.5)*tick_diff - Math.floor((sec_helix_datapoints[j][0] - 1)/200)*200*tick_diff).toFixed(0)).toString() + 'px\'></div>');}for ( j = 0 ; j < sec_strand_datapoints.length ; j++ ){$('#AutoAnnotator_container_1382695602201 #hydrophobicity_charge_placeholder' + Math.floor((sec_strand_datapoints[j][0] - 1)/200) ).append('<div class=\'AutoAnnotator_sec_strand\' style=\'width:' + (((sec_strand_datapoints[j][1] - sec_strand_datapoints[j][0] + 1)*tick_diff).toFixed(0)).toString() + 'px; left:' + ((pos_of_first_tick + (sec_strand_datapoints[j][0] - 1.5)*tick_diff - Math.floor((sec_strand_datapoints[j][0] - 1)/200)*200*tick_diff).toFixed(0)).toString() + 'px\'></div>');}}if($('#AutoAnnotator_container_1382695602201 #acc_checkbox').prop('checked') == true){for ( j = 0 ; j < acc_buried_datapoints.length ; j++ ){$('#AutoAnnotator_container_1382695602201 #hydrophobicity_charge_placeholder' + Math.floor((acc_buried_datapoints[j][0] - 1)/200) ).append('<div class=\'AutoAnnotator_acc_buried\' style=\'width:' + (((acc_buried_datapoints[j][1] - acc_buried_datapoints[j][0] + 1)*tick_diff).toFixed(0)).toString() + 'px; left:' + ((pos_of_first_tick + (acc_buried_datapoints[j][0] - 1.5)*tick_diff - Math.floor((acc_buried_datapoints[j][0] - 1)/200)*200*tick_diff).toFixed(0)).toString() + 'px\'></div>');}for ( j = 0 ; j < acc_exposed_datapoints.length ; j++ ){$('#AutoAnnotator_container_1382695602201 #hydrophobicity_charge_placeholder' + Math.floor((acc_exposed_datapoints[j][0] - 1)/200) ).append('<div class=\'AutoAnnotator_acc_exposed\' style=\'width:' + (((acc_exposed_datapoints[j][1] - acc_exposed_datapoints[j][0] + 1)*tick_diff).toFixed(0)).toString() + 'px; left:' + ((pos_of_first_tick + (acc_exposed_datapoints[j][0] - 1.5)*tick_diff - Math.floor((acc_exposed_datapoints[j][0] - 1)/200)*200*tick_diff).toFixed(0)).toString() + 'px\'></div>');}}}catch(err){txt='There was an error while drawing the selected elements for the plot.\n';txt=txt+'The originating error is:\n' + err + '\n\n';throw(txt);}}</script></html>
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