Difference between revisions of "Part:BBa K902066"
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This component uses the rhamnose promoter (P<sub>rha</sub>) to control GFP with an LVA tag. We used this circuit to characterize how the rhamnose promoter is affected by rhamnose, glucose, and lack of these sugars. Please view the [http://2012.igem.org/Team:Calgary/Notebook/Protocols/Prha_Characterization protocol] which we used to conduct this experiment. On our [http://2012.igem.org/Team:Calgary/Project/HumanPractices/Killswitch/Regulation#rhamnose Wiki], we discuss how we implemented this expression platform for control of our kill switch. | This component uses the rhamnose promoter (P<sub>rha</sub>) to control GFP with an LVA tag. We used this circuit to characterize how the rhamnose promoter is affected by rhamnose, glucose, and lack of these sugars. Please view the [http://2012.igem.org/Team:Calgary/Notebook/Protocols/Prha_Characterization protocol] which we used to conduct this experiment. On our [http://2012.igem.org/Team:Calgary/Project/HumanPractices/Killswitch/Regulation#rhamnose Wiki], we discuss how we implemented this expression platform for control of our kill switch. | ||
− | [[Image:Calgary_RhaGFPFinal.png|thumb|500px|center|Top ten <i>E coli</i> expressing GFP with P<sub>rha</sub>. Fluorescence output was measured in response to different concentrations of glucose, rhamnose, and neither of these sugars in | + | [[Image:Calgary_RhaGFPFinal.png|thumb|500px|center|Top ten <i>E coli</i> expressing GFP with P<sub>rha</sub>. <i>Figure one:</i> Fluorescence output was measured in response to different concentrations of glucose, rhamnose, and neither of these sugars. Overnight cultures of <i>E. coli</i> with K902066 were grown in LB broth. Samples were spun down, washed and resuspended in minimal media containing different sugars, and incubated at 37<sup>o</sup>C in a 96 well plate. The 0.2% rhamnose and 0.5% rhamnose showed induction of GFP whereas cells exposed to glucose minimal similar to the sample lacking either sugar.]] |
− | + | <i>Figure one</i> indicates that not only can we induce P<sub>rha</sub> with rhamnose, but that the promoter is quite tightly regulated with minimal leaky expression without the rhamnose inducer. This makes it an excellent candidate for a killswitch construct, as it would allow for very little leaky expression of any kill genes when not wanted and an easy way of inducing the kill gene expression. We later tested this promoter out with an <I>S7 micrococcal nuclease</i>. This data can be found [https://parts.igem.org/wiki/index.php?title=Part:BBa_K902084 here] | |
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Revision as of 17:22, 28 October 2012
pRha-B0034-K082003
This component uses the rhamnose promoter (Prha) to control GFP with an LVA tag. We used this circuit to characterize how the rhamnose promoter is affected by rhamnose, glucose, and lack of these sugars. Please view the [http://2012.igem.org/Team:Calgary/Notebook/Protocols/Prha_Characterization protocol] which we used to conduct this experiment. On our [http://2012.igem.org/Team:Calgary/Project/HumanPractices/Killswitch/Regulation#rhamnose Wiki], we discuss how we implemented this expression platform for control of our kill switch.
![](/wiki/images/0/0d/Calgary_RhaGFPFinal.png)
Figure one indicates that not only can we induce Prha with rhamnose, but that the promoter is quite tightly regulated with minimal leaky expression without the rhamnose inducer. This makes it an excellent candidate for a killswitch construct, as it would allow for very little leaky expression of any kill genes when not wanted and an easy way of inducing the kill gene expression. We later tested this promoter out with an S7 micrococcal nuclease. This data can be found here
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 910