Difference between revisions of "Part:BBa K733004:Design"

(→‎Design Notes)
(→‎Source)
 
(3 intermediate revisions by 2 users not shown)
Line 6: Line 6:
  
 
===Design Notes===
 
===Design Notes===
−
To easily building an antitoxin expression device, forward primer containing consensus RBS sequence in B. subtilis is designed, aiming at adding RBS directly to the upstream of ydcE gene through PCR.
+
To easily building an antitoxin expression device, forward primer containing consensus RBS sequence in ''B. subtilis'' is designed, aiming at adding RBS directly to the upstream of ''ydcE'' gene through PCR.
  
 
===Source===
 
===Source===
  
−
Not available at this moment.
+
We obtain this part from the genomic DNA of ''Bacillus subtilis 168'' via PCR.
 +
 
 +
Forward Primer: 5’- AAAGGGGGAAATAATCATTTGATTGTGAAACGC-3’ (Prefix not shown)
 +
 
 +
Reverse Primer: 5’-AATATGTCTAAAAATCAATGAGTGC-3’ (Suffix not shown)
  
 
===References===
 
===References===

Latest revision as of 19:52, 26 September 2012

RBS+ydcE


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


Design Notes

To easily building an antitoxin expression device, forward primer containing consensus RBS sequence in B. subtilis is designed, aiming at adding RBS directly to the upstream of ydcE gene through PCR.

Source

We obtain this part from the genomic DNA of Bacillus subtilis 168 via PCR.

Forward Primer: 5’- AAAGGGGGAAATAATCATTTGATTGTGAAACGC-3’ (Prefix not shown)

Reverse Primer: 5’-AATATGTCTAAAAATCAATGAGTGC-3’ (Suffix not shown)

References