Difference between revisions of "Part:BBa K819005:Reference"
 
(5 intermediate revisions by the same user not shown)
Line 13: Line 13:
 
   padding: 10px;
 
   padding: 10px;
 
   background-color: #ccccff;
 
   background-color: #ccccff;
−
   width: 200px;
+
   width: 220px;
 
   margin: 0 auto;
 
   margin: 0 auto;
 
}
 
}
Line 26: Line 26:
 
table.navi td a:hover
 
table.navi td a:hover
 
{
 
{
−
   color: #ffffaa;
+
   color: #ff3366;
 
}
 
}
 
.center
 
.center
Line 36: Line 36:
 
{
 
{
 
   text-align: justify;
 
   text-align: justify;
−
   width: 800px;
+
}
 +
p span
 +
{
 +
  margin: 0;
 +
}
 +
p.description
 +
{
 +
   width: 500px;
 
   margin: 0 auto;
 
   margin: 0 auto;
 +
  text-align: justify;
 +
  font-style: italic;
 +
}
 +
p.description.center
 +
{
 +
  text-align: center;
 
}
 
}
 
</style>
 
</style>
Line 57: Line 70:
  
  
−
'''Reference''' <br>
+
'''Reference'''
−
1. Shimizu-Sato, S., Huq, E., Tepperman, J.M., & Quail, P.H.(2002). A light-switchable gene promoter system. Nat. Biotechnol. 20: 1041: 1044 <br>
+
 
−
2. Wu, Y., Frey, D., Lungu, O.I., Jaehrig, A., Schlichting, I., Kuhlman, B. & Hahn, K.M.(2009). A genetically encoded photoactivatable Rac controls the motility of living cells. Nature, 461: 104: 8 <br>
+
1. Shimizu-Sato, S., Huq, E., Tepperman, J.M., & Quail, P.H.(2002). A light-switchable gene promoter system. Nat. Biotechnol. 20: 1041: 1044
−
3. Levskaya, A., Weiner, O.D., Lim, W.A. & Voigt, C.A.(2009). Spatiotemporal control of cell signalling using a light-switchable protein interaction. Nature, 461: 997: 1001 <br>
+
 
−
4.Möglich, A., Ayers, R.A. & Moffat, K.(2009). Design and Signaling Mechanism of Light-Regulated Histidine Kinases. J. Mol. Biol., 385: 1433: 1444 <br>
+
2. Wu, Y., Frey, D., Lungu, O.I., Jaehrig, A., Schlichting, I., Kuhlman, B. & Hahn, K.M.(2009). A genetically encoded photoactivatable Rac controls the motility of living cells. Nature, 461: 104: 8
−
5. Strickland, D., Moffat, K. & Sosnick, T.R.(2008). Light-activated DNA binding in a designed allosteric protein. Proc. Natl Acad. Sci. USA, 105: 10709: 10714 <br>
+
 
−
6. Ohlendorf, R., Vidavski, R.R., Eldar, A., Moffat, K. & Möglich, A.(2012). From Dusk till Dawn: One-Plasmid Systems for Light-Regulated Gene Expression. J. Mol. Biol., 416: 534: 542 <br>
+
3. Levskaya, A., Weiner, O.D., Lim, W.A. & Voigt, C.A.(2009). Spatiotemporal control of cell signalling using a light-switchable protein interaction. Nature, 461: 997: 1001
−
7. Toettcher, J.E., Voigt, C.A., Weiner, O.D. & Lim, W.A.(2010). The promise of optogenetics in cell biology: interrogating molecular circuits in space and time. nat. methods, 8: 35: 38 <br>
+
 
−
8. Bacchus, W. & Fussenegger, M.(2011) The use of light for engineered control and reprogramming of cellular functions. Curr.Opin. Biotechnol., 23: 1: 8 <br>
+
4.Möglich, A., Ayers, R.A. & Moffat, K.(2009). Design and Signaling Mechanism of Light-Regulated Histidine Kinases. J. Mol. Biol., 385: 1433: 1444
−
9. Cole, S.T.(1983) Charaeterisation of the Promoter
for the LexA Regulated sulA Gene of Escherichia coli. Mol. Gen. Genet., 189: 400: 404 <br>
+
 
−
10. Crane, B.R. et al.(2007) Conformational Switching in the Fungal Light Sensor Vivid. Science, 316: 1054: 1057 <br>
+
5. Strickland, D., Moffat, K. & Sosnick, T.R.(2008). Light-activated DNA binding in a designed allosteric protein. Proc. Natl Acad. Sci. USA, 105: 10709: 10714
−
11. Herrou, J. and Crosson, S.(2011) Function, structure and mechanism of bacterial photosensory LOV proteins. Nat. Rev. Microbiol., 9: 713: 723 <br>
+
 
−
12. Zoltowski, B.D., and Crane, B.R.(2008) Light activation of the LOV protein Vivid generates a rapidly exchanging dimer. Biochemistry, 47: 7012: 7019 <br>
+
6. Ohlendorf, R., Vidavski, R.R., Eldar, A., Moffat, K. & Möglich, A.(2012). From Dusk till Dawn: One-Plasmid Systems for Light-Regulated Gene Expression. J. Mol. Biol., 416: 534: 542
−
13. Zoltowski, B.D., Vaccaro, B. & Crane, B.R. Mechanism-based tuning of a LOV domain photoreceptor. Nat. Chem. Biol., 5: 827: 834 <br>
+
 
−
14. Vaidya, A.T., Chen, C.H., Dunlap, J.C., Loros, J.J., and Crane, B.R.(2011) Structure of a light-activated LOV protein dimer that regulates transcription in Neurospora crassa. Sci. Signal., 4: ra50 <br>
+
7. Toettcher, J.E., Voigt, C.A., Weiner, O.D. & Lim, W.A.(2010). The promise of optogenetics in cell biology: interrogating molecular circuits in space and time. nat. methods, 8: 35: 38
−
15. Wang, X., Chen, X. & Yang, Y.(2012) spatiotemporal control of gene expression
by a light-switchable transgene system. Nat. Methods, 9: 266: 269 <br>
+
 
−
16. Zhang, A.P.P., Pigli, Y.Z & Rice, P.A.(2010) Structure of the LexA–DNA complex and implications for SOS box measurement.Nature, 466: 883: 886 <br>
+
8. Bacchus, W. & Fussenegger, M.(2011) The use of light for engineered control and reprogramming of cellular functions. Curr.Opin. Biotechnol., 23: 1: 8
−
17. Butalaa, M., Zgur-Bertokb, D., and Busby, S. J. W.(2009) The bacterial LexA transcriptional repressor. Cell. Mol. Life Sci., 66: 82: 93 <br>
+
 
−
18. Tabor, J.J., Salis,H.M., Simpson, Z.B., Chevalier,A.A., Levskaya, A., Marcotte, E.A., Voigt, C.A., and Ellington, A.D.(2009) A Synthetic Genetic Edge Detection Program. Cell, 137: 1272: 1281 <br>
+
9. Cole, S.T.(1983) Charaeterisation of the Promoter
for the LexA Regulated sulA Gene of Escherichia coli. Mol. Gen. Genet., 189: 400: 404
−
19. Voigt., C.A., et al.(2005) Engineering Escherichia coli to see light. Nature, 438: 441: 442 <br>
+
 
−
20. Ye, H., Baba, M.D.E., Peng, R., Fussenegger, M.(2011) A Synthetic Optogenetic Transcription Device Enhances Blood-Glucose Homeostasis in Mice. Science, 332: 1565: 1568 <br>
+
10. Crane, B.R. et al.(2007) Conformational Switching in the Fungal Light Sensor Vivid. Science, 316: 1054: 1057
 +
 
 +
11. Herrou, J. and Crosson, S.(2011) Function, structure and mechanism of bacterial photosensory LOV proteins. Nat. Rev. Microbiol., 9: 713: 723
 +
 
 +
12. Zoltowski, B.D., and Crane, B.R.(2008) Light activation of the LOV protein Vivid generates a rapidly exchanging dimer. Biochemistry, 47: 7012: 7019
 +
 
 +
13. Zoltowski, B.D., Vaccaro, B. & Crane, B.R. Mechanism-based tuning of a LOV domain photoreceptor. Nat. Chem. Biol., 5: 827: 834  
 +
 
 +
14. Vaidya, A.T., Chen, C.H., Dunlap, J.C., Loros, J.J., and Crane, B.R.(2011) Structure of a light-activated LOV protein dimer that regulates transcription in Neurospora crassa. Sci. Signal., 4: ra50
 +
 
 +
15. Wang, X., Chen, X. & Yang, Y.(2012) spatiotemporal control of gene expression
by a light-switchable transgene system. Nat. Methods, 9: 266: 269
 +
 
 +
16. Zhang, A.P.P., Pigli, Y.Z & Rice, P.A.(2010) Structure of the LexA–DNA complex and implications for SOS box measurement.Nature, 466: 883: 886
 +
 
 +
17. Butalaa, M., Zgur-Bertokb, D., and Busby, S. J. W.(2009) The bacterial LexA transcriptional repressor. Cell. Mol. Life Sci., 66: 82: 93
 +
 
 +
18. Tabor, J.J., Salis,H.M., Simpson, Z.B., Chevalier,A.A., Levskaya, A., Marcotte, E.A., Voigt, C.A., and Ellington, A.D.(2009) A Synthetic Genetic Edge Detection Program. Cell, 137: 1272: 1281
 +
 
 +
19. Voigt., C.A., et al.(2005) Engineering Escherichia coli to see light. Nature, 438: 441: 442
 +
 
 +
20. Ye, H., Baba, M.D.E., Peng, R., Fussenegger, M.(2011) A Synthetic Optogenetic Transcription Device Enhances Blood-Glucose Homeostasis in Mice. Science, 332: 1565: 1568
 +
 
 +
<html><p style="height:50px;"></p></html>

Latest revision as of 17:34, 26 September 2012

Constitutive LuxBrick Generator



Reference

1. Shimizu-Sato, S., Huq, E., Tepperman, J.M., & Quail, P.H.(2002). A light-switchable gene promoter system. Nat. Biotechnol. 20: 1041: 1044

2. Wu, Y., Frey, D., Lungu, O.I., Jaehrig, A., Schlichting, I., Kuhlman, B. & Hahn, K.M.(2009). A genetically encoded photoactivatable Rac controls the motility of living cells. Nature, 461: 104: 8

3. Levskaya, A., Weiner, O.D., Lim, W.A. & Voigt, C.A.(2009). Spatiotemporal control of cell signalling using a light-switchable protein interaction. Nature, 461: 997: 1001

4.Möglich, A., Ayers, R.A. & Moffat, K.(2009). Design and Signaling Mechanism of Light-Regulated Histidine Kinases. J. Mol. Biol., 385: 1433: 1444

5. Strickland, D., Moffat, K. & Sosnick, T.R.(2008). Light-activated DNA binding in a designed allosteric protein. Proc. Natl Acad. Sci. USA, 105: 10709: 10714

6. Ohlendorf, R., Vidavski, R.R., Eldar, A., Moffat, K. & Möglich, A.(2012). From Dusk till Dawn: One-Plasmid Systems for Light-Regulated Gene Expression. J. Mol. Biol., 416: 534: 542

7. Toettcher, J.E., Voigt, C.A., Weiner, O.D. & Lim, W.A.(2010). The promise of optogenetics in cell biology: interrogating molecular circuits in space and time. nat. methods, 8: 35: 38

8. Bacchus, W. & Fussenegger, M.(2011) The use of light for engineered control and reprogramming of cellular functions. Curr.Opin. Biotechnol., 23: 1: 8

9. Cole, S.T.(1983) Charaeterisation of the Promoter
for the LexA Regulated sulA Gene of Escherichia coli. Mol. Gen. Genet., 189: 400: 404

10. Crane, B.R. et al.(2007) Conformational Switching in the Fungal Light Sensor Vivid. Science, 316: 1054: 1057

11. Herrou, J. and Crosson, S.(2011) Function, structure and mechanism of bacterial photosensory LOV proteins. Nat. Rev. Microbiol., 9: 713: 723

12. Zoltowski, B.D., and Crane, B.R.(2008) Light activation of the LOV protein Vivid generates a rapidly exchanging dimer. Biochemistry, 47: 7012: 7019

13. Zoltowski, B.D., Vaccaro, B. & Crane, B.R. Mechanism-based tuning of a LOV domain photoreceptor. Nat. Chem. Biol., 5: 827: 834

14. Vaidya, A.T., Chen, C.H., Dunlap, J.C., Loros, J.J., and Crane, B.R.(2011) Structure of a light-activated LOV protein dimer that regulates transcription in Neurospora crassa. Sci. Signal., 4: ra50

15. Wang, X., Chen, X. & Yang, Y.(2012) spatiotemporal control of gene expression
by a light-switchable transgene system. Nat. Methods, 9: 266: 269

16. Zhang, A.P.P., Pigli, Y.Z & Rice, P.A.(2010) Structure of the LexA–DNA complex and implications for SOS box measurement.Nature, 466: 883: 886

17. Butalaa, M., Zgur-Bertokb, D., and Busby, S. J. W.(2009) The bacterial LexA transcriptional repressor. Cell. Mol. Life Sci., 66: 82: 93

18. Tabor, J.J., Salis,H.M., Simpson, Z.B., Chevalier,A.A., Levskaya, A., Marcotte, E.A., Voigt, C.A., and Ellington, A.D.(2009) A Synthetic Genetic Edge Detection Program. Cell, 137: 1272: 1281

19. Voigt., C.A., et al.(2005) Engineering Escherichia coli to see light. Nature, 438: 441: 442

20. Ye, H., Baba, M.D.E., Peng, R., Fussenegger, M.(2011) A Synthetic Optogenetic Transcription Device Enhances Blood-Glucose Homeostasis in Mice. Science, 332: 1565: 1568