Difference between revisions of "Part:BBa K542006"

(New page: __NOTOC__ <partinfo>BBa_K542006 short</partinfo> Made by assembling [https://parts.igem.org/Part:BBa_K542003 BBa_K542003] with [https://parts.igem.org/Part:BBa_K542005 BBa_K542005]. ...)
 
 
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Made by assembling [https://parts.igem.org/Part:BBa_K542003 BBa_K542003] with [https://parts.igem.org/Part:BBa_K542005 BBa_K542005].
 
Made by assembling [https://parts.igem.org/Part:BBa_K542003 BBa_K542003] with [https://parts.igem.org/Part:BBa_K542005 BBa_K542005].
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The pTet promoter is constitutively "on"; thus, Arg-tagged ECFP and Arg-tagged EYFP will be produced constitutively. https://parts.igem.org/wiki/index.php?title=Part:BBa_K542003 BBa_K542003] was placed upstream of [https://parts.igem.org/Part:BBa_K542005 BBa_K542005], so that expression of the fluorescence proteins maybe "turned off" in the presence of arabinose.
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The pTet promoter is constitutively "on"; thus, Arg-tagged ECFP and Arg-tagged EYFP will be produced constitutively. [https://parts.igem.org/wiki/index.php?title=Part:BBa_K542003 BBa_K542003] was placed upstream of [https://parts.igem.org/Part:BBa_K542005 BBa_K542005], so that expression of the fluorescence proteins maybe "turned off" in the presence of arabinose.
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Fluorescence/Förster Resonance Energy Transfer(FRET) is a distance-dependent phenomenon in which the excitation of a donor fluorophore leads to emission by an acceptor fluorophore; this occurs if the two fluorophores are within a certain distance to each other. The distance is dependent on the FRET pair used. The emission spectrum of the donor fluorophore must overlap with the excitation spectrum of the acceptor fluorophore for FRET to occur. FRET is explained in further detail on the [http://2009.igem.org/Team:Lethbridge/Project#FRET Lethbridge 2009 Wiki]. This phenomenon will allow for characterizing co-localization within the Lumazine Synthase microcompartment.  
 
Fluorescence/Förster Resonance Energy Transfer(FRET) is a distance-dependent phenomenon in which the excitation of a donor fluorophore leads to emission by an acceptor fluorophore; this occurs if the two fluorophores are within a certain distance to each other. The distance is dependent on the FRET pair used. The emission spectrum of the donor fluorophore must overlap with the excitation spectrum of the acceptor fluorophore for FRET to occur. FRET is explained in further detail on the [http://2009.igem.org/Team:Lethbridge/Project#FRET Lethbridge 2009 Wiki]. This phenomenon will allow for characterizing co-localization within the Lumazine Synthase microcompartment.  
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Intermediate part to assemble the "Co-localization Testing Construct". ([https://parts.igem.org/Part:BBa_K542008 BBa_K542008])
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This part was characterized in <html><a href="https://parts.igem.org/Part:BBa_K542008"><font color="blue">BBa_K542008</font></a></html> in <i>E. coli</i> strain DH5alpha demonstrating this is a functional intermediate in that construct. The data sheet for BBa_K542008 is shown below.
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[[image:uoflECdatasheet.png|150px]]
  
 
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Latest revision as of 02:01, 29 September 2011

pBAD Inverse-Regulated Arg-tagged ECFP and EYFP (FRET Reporter)

Made by assembling BBa_K542003 with BBa_K542005.

The pTet promoter is constitutively "on"; thus, Arg-tagged ECFP and Arg-tagged EYFP will be produced constitutively. BBa_K542003 was placed upstream of BBa_K542005, so that expression of the fluorescence proteins maybe "turned off" in the presence of arabinose.

Fluorescence/Förster Resonance Energy Transfer(FRET) is a distance-dependent phenomenon in which the excitation of a donor fluorophore leads to emission by an acceptor fluorophore; this occurs if the two fluorophores are within a certain distance to each other. The distance is dependent on the FRET pair used. The emission spectrum of the donor fluorophore must overlap with the excitation spectrum of the acceptor fluorophore for FRET to occur. FRET is explained in further detail on the [http://2009.igem.org/Team:Lethbridge/Project#FRET Lethbridge 2009 Wiki]. This phenomenon will allow for characterizing co-localization within the Lumazine Synthase microcompartment.

Intermediate part to assemble the "Co-localization Testing Construct". (BBa_K542008)

This part was characterized in BBa_K542008 in E. coli strain DH5alpha demonstrating this is a functional intermediate in that construct. The data sheet for BBa_K542008 is shown below.

UoflECdatasheet.png

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 125
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 65
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]