Difference between revisions of "Part:BBa K342003"
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<p>The pIG16 and pIG3 were inserted in strain constitutively expressing GFP.
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<p>The pIG16 (BBa_J23119-OmpR234 in pSB1A2) and pIG3 (BBa_J23119 part in pSB1A2) were inserted in a strain constitutively expressing GFP, PHL1414 (MG1655 with a chromosomical insertion of GFP). The strains were respectively named S31 and S30.
 
In sterile empty plates, we introduced 10mL of M63G, with 100μL of Amp and 100μL of bacteria from a saturated liquid culture.</p>
 
In sterile empty plates, we introduced 10mL of M63G, with 100μL of Amp and 100μL of bacteria from a saturated liquid culture.</p>
  
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<p>We can see that the strain containing the pIG16 plasmid is more adherent than the strain containing the control plasmid pIG3.</p>
 
<p>We can see that the strain containing the pIG16 plasmid is more adherent than the strain containing the control plasmid pIG3.</p>
  
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<p><b>Conclusion</b>: The 18A-OmpR234 part increases the stickiness of a part.</p>
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<p><b>Conclusion</b>: The BBa_J23119-OmpR234 part increases the stickiness of a part.</p>
  
  
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<p>
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For characterization, the plasmids are introduced in PHL1414 strain. The strain with pIG16 plasmid (18A-OmpR234 in pSB1A2) is noted S31 and the control strain with the pIG3 plasmid (18A part in pSB1A2) is noted S30.
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For characterization, the plasmids are introduced in PHL1414 strain. The strain with pIG16 plasmid is noted S31 and the control strain with the pIG3 plasmid is noted S30.
 
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</p>
 
<p>
 
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<p><b>Conclusion</b>: we can see a strong increase of stickiness when the part 18A-OmpR234 is introduced.</p><br>
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<p><b>Conclusion</b>: we can see a strong increase of stickiness when the part BBa_J23119-OmpR234 is introduced.</p><br>
  
  

Revision as of 13:02, 21 September 2011

OmpR234 protein, with higher effect on Curli promoter


This part is coding for a mutated protein OmpR. This protein will be phosphorylated by the complex EnvZ. This mutated phosphorylated protein is a better activator of the Curli promoter than OmpR.

Usage and Biology

This part can be used to induce a constitutive biofilm producing phenotype in bacteria.


Characterization (New data, 2011)

Microscopy tests

The pIG16 (BBa_J23119-OmpR234 in pSB1A2) and pIG3 (BBa_J23119 part in pSB1A2) were inserted in a strain constitutively expressing GFP, PHL1414 (MG1655 with a chromosomical insertion of GFP). The strains were respectively named S31 and S30. In sterile empty plates, we introduced 10mL of M63G, with 100μL of Amp and 100μL of bacteria from a saturated liquid culture.

Then, we added 3 or 4 sterile glass slides and incubated at 30°C for 23 hours. If the strain produce some curli, it will form biofilm on the glass slides. We washed carefully the slides not to eliminate adherent bacteria.

We observed the surface of the slides with a fluorescent microscope to look if there was a biofilm. Several sites in the slides were photographed, the best pictures are presented here.

We can see that the strain containing the pIG16 plasmid is more adherent than the strain containing the control plasmid pIG3.

Conclusion: The BBa_J23119-OmpR234 part increases the stickiness of a part.


Quantitative adherence tests in plates

For characterization, the plasmids are introduced in PHL1414 strain. The strain with pIG16 plasmid is noted S31 and the control strain with the pIG3 plasmid is noted S30.

The effect of the plasmid on the adherence is measured.

To that end the strains are seeded in 24 wells plate.

The measure of the OD 600 will give the percentage of adherence of the bacteria and the violet crystal coloration will give us a first idea on the formation of biofilm.


Conclusion: The OD600 seemed to be the same for the two strains. There is no effect of the plasmid on the growth.


The percentage of adherence is now measured for both strains

Conclusion: we can see a strong increase of stickiness when the part BBa_J23119-OmpR234 is introduced.



Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 137
  • 1000
    COMPATIBLE WITH RFC[1000]