Difference between revisions of "Part:BBa K118022:Experience"

Revision as of 14:12, 13 September 2011

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Applications of BBa_K118022

Characterization

Edinburgh 2011 conducted two assays, comparing the activity of this part (but under the control of the lac promoter, giving BBa_K523016) to a β-glucosidase (E. coli bglX, also under the control of the lac promoter) on two different substrates:

4-methylumbelliferyl β- D- glucuronide (MUG, left photo). This substrate is a cellobiose analog.
4-methylumbelliferyl β- D- cellobioside (MUC, right photo). This substrate is larger and is more like a cellulose analog.

Both substrates produce a fluorescent product when cleaved. Our plates below show the results of placing cell lysate and cell debris on an MUG plate and an MUC plate. Present on both plates are:

Left side of plate: JM109 expressing bglX, BBa_K523014
Right side of plate: JM109 expressing exoglucanase cex, BBa_K523016
Bottom of plate: JM109 cells


MUG assay. bglX on left, cex on right.		MUC assay. bglX on left, cex on right.

As can be seen, bglX is capable of degrading MUG (the cellobiose analog) while exoglucanase displays much weaker activity. By contrast, exoglucanase is much better at degrading MUC.

User Reviews

UNIQ4db44e5b9adc9367-partinfo-00000003-QINU UNIQ4db44e5b9adc9367-partinfo-00000004-QINU

@@ Line 14: / Line 14: @@
 Both substrates produce a fluorescent product when cleaved. Our plates below show the results of placing cell lysate and cell debris on an MUG plate and an MUC plate. Present on both plates are:
-* Left side of plate: JM109 expressing this part, K523014
+* Left side of plate: JM109 expressing ''bglX'', <partinfo>BBa_K523014</partinfo>
 * Right side of plate: JM109 expressing exoglucanase ''cex'', <partinfo>BBa_K523016</partinfo>
 * Bottom of plate: JM109 cells