View source for Part:BBa K190028:Graphs/GlpFTransport

{
script: "var Vcells=getInput('Vcells'),\
             Vtotal=getInput('Vtotal');\
         var Vsolution = Vtotal - Vcells;\
         var c = arsenicModelConstants();\
         c.Vc = Vcells*1e-3;\
         c.Vs = Vsolution*1e-3;\
         c.AsT = c.Vs*getInput('As3exInitial')*1e-6;\
         c.v5 = getInput('v5')*1e-6;\
         c.K5 = getInput('K5')*1e-6;\
         c.ars2T = 0;\
         c.pro = 0;\
         c.beta4 = 0;\
         var data = simulate(arsenicModelInitialization(c),3600,function(t,x){return arsenicModelGradient(c,x);});\
         var d=[{title:'As(III)<sub>ex</sub>T',data:[],args:{plot:'outer',{{:Groningen2009/Styles/As(III)ex}}}},\
                {title:'As(III)<sub>in</sub>T',data:[],args:{plot:'inner',{{:Groningen2009/Styles/As(III)}}}}];\
         var t = Number.NEGATIVE_INFINITY;\
         for(var i=0; i<data.time.length; i++) {\
           var f=data.time[i]/60;\
           if (f>=t+0.1) {\
             t = t+0.1;\
             d[0].data.push({x:f,y:data.AsexT[i]*1e6});\
             d[1].data.push({x:f,y:data.AsinT[i]*1e6});\
           }\
         }\
         d.push({title:'As(III)<sub>ex</sub>T Meng2004',\
                 data:[{x:1,y:8.47076050151002}, {x:10,y:6.51596961654617}, {x:20,y:4.3195753637778},\
                       {x:40,y:1.72783014551112}, {x:60,y:0.9371282145145}],\
                 args:{plot: 'outer', {{:Groningen2009/Styles/As(III)ex}}}});\
         d.push({title:'As(III)<sub>in</sub>T Meng2004',\
                 data:[{x:1,y:101.917808219178}, {x:10,y:394.520547945205}, {x:20,y:723.287671232877},\
                       {x:40,y:1111.23287671233}, {x:60,y:1229.58904109589}],\
                 args:{plot: 'inner', {{:Groningen2009/Styles/As(III)}}}});\
         for(j=2; j<d.length; j++) d[j].args.stroke.style = 'Dash';\
         d;",
width: '10cm',
height: '8cm',
axes: {x: {title: "time (min)", minorLabels: false}, innery: {title: "concentration in cell (µM)", vertical: true, min: 0}, outery: {title: "concentration in solution (µM)", vertical: true, leftBottom: false, min: 0} },
plots: { 'inner': {type: 'Lines', vAxis: 'innery'}, 'outer': {type: 'Lines', vAxis: 'outery'} }
}