File list

This special page shows all uploaded files.

File list
 
Date Name Thumbnail Size Description Versions
03:33, 2 October 2022 BBa K4347012 wb.PNG (file) 126 KB Western blot of purified sso7d polymerase 1
03:29, 2 October 2022 BBa K4347012 expression Sso7d.PNG (file) 215 KB Expression and purification of Sso7d fusion polymerase 1
03:18, 2 October 2022 BBa K4347011 expression.PNG (file) 227 KB Expression of sac7e fusion protien 1
03:10, 2 October 2022 BBa K4347012 sso7d fusion.PNG (file) 117 KB DNA-BP Ssso7d fused to modified Bst polymerase 1
02:32, 2 October 2022 BBa K4347012 sso7d.PNG (file) 16 KB DNA-BP Sso7d 1
19:18, 22 July 2022 BBa K4347000 MEME.PNG (file) 24 KB Conserved motif (MEME) analysis 1
19:10, 22 July 2022 BBa K4347005 BL.PNG (file) 79 KB Backward loop primer in LAMP 1
19:09, 22 July 2022 BBa K4347002 FL.PNG (file) 75 KB Forward Loop primer of LAMP 1
18:59, 22 July 2022 BBa K4347002 BIP AND B3.PNG (file) 74 KB BIP and B3 from LAMP reaction. 1
18:52, 22 July 2022 BBa K4347000 FIP AND F3.PNG (file) 81 KB Forward inner and forward backwards primers 1
20:26, 21 July 2022 BBa K4347000 LAMP.PNG (file) 491 KB Basic schematic of LAMP reaction from Wong et, al (2017) 1
19:39, 20 July 2022 BBa K4347011 bst full fusion.PNG (file) 97 KB Fully modified Bst polymerase with fusion protien and point mutations modelled in Pymol. 1
17:05, 20 July 2022 BBa K4347007 stability point muts.PNG (file) 4 KB Thermal stability of mutated Bst polymerase computed from YASARA. 1
16:40, 20 July 2022 BBa K43470011 bst fusion stability.PNG (file) 4 KB Bst fusion protien thermal stability computed from YASARA. 1
16:37, 20 July 2022 BBa K4347010 bst full fusion stability.PNG (file) 4 KB Protien stability score of fused modified Bst polymerase computed from YASARA. 1
13:47, 19 July 2022 BBa K4347010 bst fusion wout point mut.PNG (file) 87 KB Wildtype Bst polymerase fused with Sac7e 1
13:27, 19 July 2022 Bst2.png (file) 109 KB   1
20:59, 18 July 2022 BBa K43470010 bst.PNG (file) 97 KB Bst polymerase derived from thermophilic bacterium Geobacillus stearothermophilus used in LAMP modelled on Pymol. 1
20:34, 18 July 2022 BBa K4347006 sac7e w.PNG (file) 29 KB DNA binding protien "Sac7e" modelled in Pymol. 1
14:13, 18 July 2022 BBa K4347006 sac7e.PNG (file) 16 KB DNA binding protien "Sac7e" modelled in Pymol 1
20:05, 12 July 2022 BBa K4347007 bst point mut close.PNG (file) 123 KB Close up of point mutations in Bst polymerase thumb domain modelled in Pymol. 1
20:01, 12 July 2022 BBa K4347007 bst point mut.PNG (file) 87 KB Full Bst structure with point mutations (orange) in thumb domain. 1
18:14, 12 July 2022 BBa K4347007 K582.PNG (file) 52 KB YASARA position scan results for possible point mutations at residue K582. 1
17:56, 12 July 2022 BBa K4347007 Q584.PNG (file) 50 KB YASARA position scan results for possible point mutations at residue Q584. 1
17:41, 12 July 2022 BBa K4347007 K549.PNG (file) 49 KB YASARA position scan results for possible point mutations at residue K549. 1
14:43, 12 July 2022 BBa K4347007--seaview.PNG (file) 108 KB Protien sequence alignment of Bst (6MU5) and Klentaq (6QV4) in Seaview. 1
18:33, 11 July 2022 BBa K4347007-bst KF.PNG (file) 120 KB st polymerase (green) superimposed with Klenow fragment (white) from DNA polymerase I from E.coli in Pymol. 1
18:07, 11 July 2022 BBa K4347007-bst taq.PNG (file) 110 KB Bst polymerase (green) superimposed with Klentaq fragment (white) from Taq polymerase in Pymol. 1
15:47, 11 July 2022 BBa K4347007--bst.PNG (file) 97 KB Bst polymerase derived from thermophilic bacterium Geobacillus stearothermophilus used in LAMP modelled on PyMol. 2
18:11, 3 July 2021 BBa K3767004 OspA colored.png (file) 299 KB Figure 1. Colored model of purified OspA from E.Coli. 1
01:09, 30 June 2021 BLAST Scores ScFv.png (file) 33 KB Figure 5. Folding confidence model obtained for VH and VL confidence values of 0.89 and 0.99 using ABodyBuilder. 1
00:48, 30 June 2021 3-24 + 40x phoA.png (file) 333 KB Figure 4. The final ScFv sequence (blue and green) plus the improved phoA (red) respectively. 1
00:39, 30 June 2021 BBa K3767001 phoA colored (flipped).png (file) 238 KB Figure 1: 3D representation of the alkaline phosphatase. </b> A and B domains shown in red and green respectively. Zinc and Magnesium highlighted in grey and blue respectively 1
23:17, 29 June 2021 PhoA substrates.png (file) 29 KB Figure 2. General mechanism of phosphate monoester hydrolysis via the catalysis from phoA<sup>[3]</sup>. 1