Part:BBa_K5302038
pBBR-INP-VEGFR1D2-l1masking#18
This work is derived from pBBR-INP-VEGFR1D2 and pUC19-VEGFR-masking#18, and it has undergone codon optimization. This composite part combines INP(about 30kda) and VEGFR1D2(approximately 12kda), and it adds a fragment as a mask. We succeeded in transferring this plasmid into Escherichia coli Nissle 1917 and let it express VEGFR1D2. The plasmid uses lac promotor and has kanamycin resistence.
This part is a peptidic mimics of VEGF α1 helix, it is derived from VEGF-B L1 and forms a helix structure. It exhibits high affinity for VEGFR-like receptors, with an IC50 value of 10 μM, allowing it to effectively compete with VEGF for binding to VEGFR. Consequently, this peptide has been utilized as a masking agent. Upon administration into the human body, it preemptively binds to VEGFR, preventing VEGF from engaging with the receptor. Given that matrix metalloproteinases (MMPs) are present at high concentrations in the tumor microenvironment (TME), they can degrade this VEGFR-masking peptide (designated as #29). This degradation allows VEGF to subsequently bind to the VEGFR-like receptors, triggering their activation. Therefore, this peptide functions as a biological switch, becoming active when exposed to the TME upon the entry of engineered chimeric nanoparticles (Escherichia coli Nissle 1917).
Sequence and Features
- 10INCOMPATIBLE WITH RFC[10]Illegal EcoRI site found at 4614
Illegal XbaI site found at 3189
Illegal PstI site found at 2016
Illegal PstI site found at 3177 - 12INCOMPATIBLE WITH RFC[12]Illegal EcoRI site found at 4614
Illegal PstI site found at 2016
Illegal PstI site found at 3177
Illegal NotI site found at 1057 - 21INCOMPATIBLE WITH RFC[21]Illegal EcoRI site found at 4614
Illegal BglII site found at 1803
Illegal BamHI site found at 3195 - 23INCOMPATIBLE WITH RFC[23]Illegal EcoRI site found at 4614
Illegal XbaI site found at 3189
Illegal PstI site found at 2016
Illegal PstI site found at 3177 - 25INCOMPATIBLE WITH RFC[25]Illegal EcoRI site found at 4614
Illegal XbaI site found at 3189
Illegal PstI site found at 2016
Illegal PstI site found at 3177
Illegal NgoMIV site found at 2467
Illegal NgoMIV site found at 2750
Illegal NgoMIV site found at 3616
Illegal NgoMIV site found at 5279
Illegal AgeI site found at 4193
Illegal AgeI site found at 5119 - 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 1379
Illegal SapI.rc site found at 2316
Illegal SapI.rc site found at 2526
biology | Escherichia coli Nissle 1917 |