Part:BBa_K5302033
OmpA-VEGFR1D2-l2masking#18
This work is derived from pBBR-OmpA-VEGFR1D2 and pUC19-VEGFR-masking#18, and it has undergone codon optimization. This composite part combines OmpA(21.4kda) and VEGFR1D2(approximately 12kda), and it adds a fragment as a mask. We succeeded in transferring this plasmid into Escherichia coli Nissle 1917 and let it express VEGFR1D2. The plasmid uses lac promotor and has kanamycin resistence.
This part is a peptidic mimics of VEGF α1 helix, it is derived from VEGF-B L1 and forms a helix structure. It exhibits high affinity for VEGFR-like receptors, with an IC50 value of 10 μM, allowing it to effectively compete with VEGF for binding to VEGFR. Consequently, this peptide has been utilized as a masking agent. Upon administration into the human body, it preemptively binds to VEGFR, preventing VEGF from engaging with the receptor. Given that matrix metalloproteinases (MMPs) are present at high concentrations in the tumor microenvironment (TME), they can degrade this VEGFR-masking peptide (designated as #29). This degradation allows VEGF to subsequently bind to the VEGFR-like receptors, triggering their activation. Therefore, this peptide functions as a biological switch, becoming active when exposed to the TME upon the entry of engineered chimeric nanoparticles (Escherichia coli Nissle 1917).
Sequence and Features
- 10INCOMPATIBLE WITH RFC[10]Illegal EcoRI site found at 2376
Illegal XbaI site found at 1296
Illegal PstI site found at 123
Illegal PstI site found at 1284 - 12INCOMPATIBLE WITH RFC[12]Illegal EcoRI site found at 2376
Illegal PstI site found at 123
Illegal PstI site found at 1284
Illegal NotI site found at 5308 - 21INCOMPATIBLE WITH RFC[21]Illegal EcoRI site found at 2376
Illegal BglII site found at 6054
Illegal BamHI site found at 1302 - 23INCOMPATIBLE WITH RFC[23]Illegal EcoRI site found at 2376
Illegal XbaI site found at 1296
Illegal PstI site found at 123
Illegal PstI site found at 1284 - 25INCOMPATIBLE WITH RFC[25]Illegal EcoRI site found at 2376
Illegal XbaI site found at 1296
Illegal PstI site found at 123
Illegal PstI site found at 1284
Illegal NgoMIV site found at 574
Illegal NgoMIV site found at 857
Illegal NgoMIV site found at 3034
Illegal AgeI site found at 1955
Illegal AgeI site found at 2874 - 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 5630
Illegal SapI.rc site found at 423
Illegal SapI.rc site found at 633
biology | Escherichia coli Nissle 1917 |