Part:BBa_K5302015
pBBR-AIDA-mCherry
This work is derived from pBBR1MCS-2 and mCherry-middle, and it has undergone codon optimization. This composite part combines AIDA(approximately 63.8kda) and mCherry(26.7kda), and we succeeded in transferring this plasmid into Escherichia coli Nissle 1917 and let it express mCherry as a fluorescence labeling.The plasmid uses lac promotor and has kanamycin resistence. AIDA-I (Adhesin involved in diffuse adherence-I) is a self-transporter from enteropathogenic Escherichia coli (EPEC), which displays the target protein on the bacterial surface through a self-transport mechanism. It contains several key domains: an N-terminal signal peptide, a passenger domain (acting outside the cell), a connecting domain and a transport domain, which is predicted to form a β barrel structure and integrate into the outer membrane, forming channels for transport of the passenger domain. The transport mechanism of AIDA-I can be exploited to display recombinant proteins on the surface of E. coli.
Sequence and Features
- 10INCOMPATIBLE WITH RFC[10]Illegal EcoRI site found at 3610
Illegal EcoRI site found at 3658
Illegal EcoRI site found at 3931
Illegal EcoRI site found at 4531
Illegal EcoRI site found at 5227
Illegal XbaI site found at 3421
Illegal PstI site found at 2016
Illegal PstI site found at 3919
Illegal PstI site found at 4579
Illegal PstI site found at 5165 - 12INCOMPATIBLE WITH RFC[12]Illegal EcoRI site found at 3610
Illegal EcoRI site found at 3658
Illegal EcoRI site found at 3931
Illegal EcoRI site found at 4531
Illegal EcoRI site found at 5227
Illegal PstI site found at 2016
Illegal PstI site found at 3919
Illegal PstI site found at 4579
Illegal PstI site found at 5165
Illegal NotI site found at 1057
Illegal NotI site found at 4303 - 21INCOMPATIBLE WITH RFC[21]Illegal EcoRI site found at 3610
Illegal EcoRI site found at 3658
Illegal EcoRI site found at 3931
Illegal EcoRI site found at 4531
Illegal EcoRI site found at 5227
Illegal BglII site found at 1803
Illegal BglII site found at 3414
Illegal BamHI site found at 5429
Illegal XhoI site found at 4276 - 23INCOMPATIBLE WITH RFC[23]Illegal EcoRI site found at 3610
Illegal EcoRI site found at 3658
Illegal EcoRI site found at 3931
Illegal EcoRI site found at 4531
Illegal EcoRI site found at 5227
Illegal XbaI site found at 3421
Illegal PstI site found at 2016
Illegal PstI site found at 3919
Illegal PstI site found at 4579
Illegal PstI site found at 5165 - 25INCOMPATIBLE WITH RFC[25]Illegal EcoRI site found at 3610
Illegal EcoRI site found at 3658
Illegal EcoRI site found at 3931
Illegal EcoRI site found at 4531
Illegal EcoRI site found at 5227
Illegal XbaI site found at 3421
Illegal PstI site found at 2016
Illegal PstI site found at 3919
Illegal PstI site found at 4579
Illegal PstI site found at 5165
Illegal NgoMIV site found at 2467
Illegal NgoMIV site found at 2750
Illegal NgoMIV site found at 6052
Illegal AgeI site found at 4137
Illegal AgeI site found at 5892 - 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 1379
Illegal SapI.rc site found at 2316
Illegal SapI.rc site found at 2526
biology | Escherichia coli Nissle 1917 |