Coding

Part:BBa_K2408002

Designed by: Yaakov Bulka   Group: iGEM17_Tel-Hai   (2017-08-23)


4CL

4CL (4-coumarate--CoA ligase 2) from Vitis vinifera optimized for S. cerevisae.

4-coumarate--CoA ligase 1 is an ATP dependent enzyme that catalyzes the conversion of p-coumaric acid to p-Coumaroyl-CoA. It is the second enzyme in the resveratrol biosynthesis pathway.
Enzyme activity: ATP + p-coumaric acid + CoA => AMP + diphosphate + p-Coumaroyl-CoA
This sequence contains ‘6 His tag’ downstream from the gene, and was optimised for S.cerevisiae using IDT sequence optimisation tool.


Hamberger, B., & Hahlbrock, K. (2004). The 4-coumarate: CoA ligase gene family in Arabidopsis thaliana comprises one rare, sinapate-activating and three commonly occurring isoenzymes. Proceedings of the National Academy of Sciences, 101(7), 2209-2214.‏ ISO 690


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 424
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 1531
    Illegal BamHI site found at 1150
    Illegal BamHI site found at 1194
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
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