Coding

Part:BBa_K2981004

Designed by: CHEN,JING   Group: iGEM19_NWU-China   (2019-10-02)


TyrR, a DNA binding protein, controls the biosynthesis of Phe and Tyr in E. coli

The biosynthesis of Phe and Tyr in E. coli is controlled by the DNA binding protein TyrR. The TyrR protein binds to the consensus DNA sequence TGTAAAN6TTTACA (referred to as the TyrR box), which is classified as strong or weak. In the presence of Phe, binding of the TyrR dimer to the strong cassette in vitro strongly induces gene expression by promoting binding of the RNA polymerase to the promoter or promoting binding of the second dimer to the adjacent weak box. In the presence of Tyr and ATP, the TyrR dimer self-associates to form a hexamer, and the hexamer binds weakly to the weak consensus of the consensus sequence, due to weak-frame-bound RNA polymerase forming an open complex or leaving the initiation Impaired ability of the child leads to inhibition of gene expression. Thereby regulating the repression of aroF, tyrP.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 720
    Illegal BglII site found at 1062
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 526
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
None